LOC120563194


Basic Information

Item Value
gene id LOC120563194
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 21458499 ~ 21461211 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807363.1
AAAGAAAACTGCCACTGCTTCCATTGGAAGACTGAAACGAAGCTCCTTCGCATGTTTGCCAACCGGCTGCCAATTCGTCCGAGTCGCCACTAATTAGCCCCAGCTGTGCCTGCGTGCTGGTTTCACGTGCAGATTGAAAGGGAAAGGTAGAAGGACAGCAGTCTTTAGCGATGAAAATGTGGCGTCTCTATATTTTGTGCGGTGTTTTATCACTTTGCCTCCTCAGCTGTGCAATGGGCACTTATGAATCTCCACTTACCCgaagaaaaaaacttttcaaaCTGGGTACTCCGAAATCCCAATCAATTCAGCAGTCAAGAACAGACTATAGAAAATCCTCTCCGAGGTCAGGCCTACCTACCAGCATTTCTCCAGTGTCTCCACTGAGTTCCCAAAGGCCTTACCCTCCTCTGACCCCTCGACCCATGCGTCCATTGGAGCCCGAGGCAAAGATCCAGTCGGACTCTGCTTACCTCCCAGACGTTTCTGTAACCTGCTCCACGTCTGACGTTGTCGTGCGGGTCAAACCAGCTTTCTACGGTCTGGGCGCAGATACAGAGGAGCTGAAATtaggcagcaactgcaaaagcaaCGGGGTTCTCAGGCCGAACGGTGACCTGCTTTTCACGTATCCCCTGACAGCGTGTGATGCCGTGCGTGAGTCGCCCGACGGGTATCTGCTCTACAAATACGAGCTCCATTATGAGCCTTCTGGAGAGCGGTTTCCAAGGATGACTGTCGACATTGAATGCCGTTATCAAAgGAGCAACCATGTGCATCGTCTGATTGTGCGGCCCACCTGGGAAACTGCTGTTGTGCGTAAATGGCTGAAAGGAAGTCCAACTGACTTCCAGATAGAGTTGATGGATGATTCATGGAGCACACCTGCCGAGTCTCAGGTCTACCAGCTTGGAAAGACCGTTAATTTCGAGGTCTCTGCTCCTAATCTCTCAAATGGTGGAAAACTGTACATCAATACCTGCCATGCTACACCATCCAGTGGCTCTAAATCACATATACTCAAATACACAATCATTGACAATTTTGGCTGTTTGTTGGACAGCAAGAGCAACCCAGGGGCCTCTCAGTTCATCTCTCGGACAGACAATTCCCTAAGATTCTCCCTAAAGGCTTTCAAGTTTACTTCTGACCCTAACCCGGAGatCCGTATTGACTGCAGTTTGTTTGTTACACCTGAGGATGCAGGTCCTACACACAAATCGTGCACCTACGTAGGGAACGGGTGGAAGGCCCTCACTGGTGATGACTCCATATGTGAATGCTGTGATTCACAATGTGTGACCTCTAACCCCCAGAGGGCCATGATGGAAGGCTCTGCCAGCAGTGAGTCATTGTTGGTCTCTGATCGGCCATACACAGAAGATTCTTTCCTACCGGTCAGCATGAGCAGAGAAGGTGAGACCCCGTGGAAAAGTGCCGAAGTAGTAAAGTATGATGACAAAGTGCAAGATTATGAGCAGCAGCTTGAAGATGAAGAGGAAAGTGGGGTTGTCTCTGGAGTGATGATGGAGCCTGATTTAGAGGAGTTGGGTTTTAGGAGGAGGGTCTTagtggaggaggaagactgTAAAGTGAAGGATTCAAATCGGTTCCAAGAGGATGGGTCAGGGTATGTagtggagggggaggagggattTGAAGGAAGAGAAGATGAGATCCATTTGAATCCAAAGGAAGGCAAAGCATTGCGTCACTGGGGAGAGGTAGAGCCACTGGTCTCTGAAGGCAGGGAAGAAAACTGGAAGCATACAGATGGAGGTGAAGAGGATGACGGGACGACATCCTCTGAGGTGGAGTGGAAGACTGGTCTGGCAGATTTCAGAGACGATAGTGAGAGGACCTGGTATTTCACATGGAGGTAGCATTAGTTTAATGAATGTTCAGTACTCTGCTCAAAGACTAACTCTCTAACAACAgaacttatgacttttttcaataaaaacctgaacATGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807363.1 True 1975 mRNA 0.49 8 21458499 21461211

Neighbor

gene id symbol gene type direction distance location
nmt2 nmt2 coding upstream 61973 21389889 ~ 21396526 (+)
fam171a1 fam171a1 coding upstream 71193 21361594 ~ 21387306 (+)
l3mbtl1b l3mbtl3 coding upstream 129052 21315069 ~ 21329447 (+)
sgk2b NA coding upstream 146433 21308878 ~ 21312066 (+)
esrp1 esrp1 coding upstream 189645 21256725 ~ 21268854 (+)
rundc3b rundc3b coding downstream 5858 21467069 ~ 21478945 (+)
dbf4 NA coding downstream 23838 21485049 ~ 21491551 (+)
adam22 adam22 coding downstream 32203 21493414 ~ 21556018 (+)
osgin2 osgin2,LOC102787809 coding downstream 100577 21561788 ~ 21570071 (+)
si:dkey-87o1.2 NA coding downstream 133860 21595071 ~ 21597057 (+)
G74288 NA non-coding upstream 166119 21291042 ~ 21292380 (+)
G74287 NA non-coding upstream 168185 21289553 ~ 21290314 (+)
G74286 NA non-coding upstream 169124 21289171 ~ 21289375 (+)
G74274 kiaa1429,LOC104941925 non-coding upstream 214932 21243229 ~ 21243567 (+)
G74233 NA non-coding upstream 305987 21150389 ~ 21152512 (+)
LOC120562851 NA non-coding downstream 263737 21724948 ~ 21725705 (+)
G74673 NA non-coding downstream 575067 22036278 ~ 22036659 (+)
G74729 NA non-coding downstream 654405 22115616 ~ 22116026 (+)
G74732 NA non-coding downstream 658527 22119738 ~ 22121346 (+)
G74737 NA non-coding downstream 668441 22129652 ~ 22129914 (+)
crot acbd7,crot,LOC102783617,LOC101470173 other upstream 42605 21403035 ~ 21415894 (+)
LOC120563169 NA other upstream 121834 21331412 ~ 21336665 (+)
sec61b sec61b,LOC102796100 other upstream 447085 21008013 ~ 21011414 (+)
glipr2l glipr2 other upstream 853334 20600323 ~ 20605165 (+)
gra NA other upstream 1132538 20322330 ~ 20325961 (+)
them4 LOC106592246,LOC104959154,LOC101466288,LOC107096308,LOC100702377,LOC105029233,LOC106575342 other downstream 137823 21599034 ~ 21603458 (+)
G74633 tuft1,LOC102781808 other downstream 308337 21769548 ~ 21770286 (+)
slc50a1 slc50a1 other downstream 622458 22083669 ~ 22091963 (+)
LOC120561539 NA other downstream 671367 22132578 ~ 22136234 (+)
LOC120561537 NA other downstream 676336 22137547 ~ 22139223 (+)

Expression


Co-expression Network