LOC120561615


Basic Information

Item Value
gene id LOC120561615
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 8646964 ~ 8647709 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639619.1
ccagcatgtccatatctatCCTGGAATTAAGAAGAATACCCAGCTCCAGAGAAATCAAGTGCCCCCAGATGGCCAAATATGCATGTCCCATTgatgcccagcatgtccatatctatCCTGGAATTAAGAAGAATACCCAGCTCCAGAGAAATCAAGTGCCCCCAGATGGCCAAATATGCATGTCCCATTGATacccagcatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639619.1 True 202 lncRNA 0.47 3 8646964 8647709

Neighbor

gene id symbol gene type direction distance location
LOC120562241 NA coding upstream 142512 8454764 ~ 8504452 (+)
pomgnt2 pomgnt2 coding upstream 262344 8364356 ~ 8384620 (+)
zgc:114181 LOC104932954,LOC102799802,LOC101469313 coding upstream 448103 8187287 ~ 8198861 (+)
rwdd1 rwdd1 coding upstream 525638 8114521 ~ 8121326 (+)
LOC120561725 fam26e,LOC103478772,LOC106963711 coding upstream 537599 8104864 ~ 8109365 (+)
LOC120562991 LOC103388880 coding downstream 440475 9088184 ~ 9101502 (+)
popdc3 popdc3 coding downstream 468002 9115711 ~ 9123087 (+)
bves bves coding downstream 480141 9127850 ~ 9144754 (+)
hace1 hace1 coding downstream 499906 9147615 ~ 9190089 (+)
ascc3 ascc3 coding downstream 1359566 10007275 ~ 10200405 (+)
G71429 NA non-coding upstream 26625 8594033 ~ 8620339 (+)
G71424 NA non-coding upstream 91686 8552529 ~ 8555278 (+)
G71421 NA non-coding upstream 98174 8548532 ~ 8548790 (+)
G71348 NA non-coding upstream 132571 8506859 ~ 8514393 (+)
LOC120562242 NA non-coding upstream 172373 8473270 ~ 8474591 (+)
G71463 NA non-coding downstream 95819 8743528 ~ 8743790 (+)
G71476 NA non-coding downstream 118185 8765894 ~ 8766134 (+)
G71475 NA non-coding downstream 120979 8768688 ~ 8769064 (+)
G71517 NA non-coding downstream 475454 9123163 ~ 9125732 (+)
G71553 NA non-coding downstream 672743 9320452 ~ 9320696 (+)
ano10a ano10 other upstream 337220 8283380 ~ 8309744 (+)
G71309 NA other upstream 524725 8121601 ~ 8122239 (+)
G71147 LOC103388722,LOC104941093,LOC103369890 other upstream 845584 7731022 ~ 7801380 (+)
znrf2b znrf2 other upstream 1146782 7456767 ~ 7500182 (+)
cdk14 cdk14 other upstream 1354529 7039163 ~ 7292435 (+)
G71470 rrp15,LOC106584165,LOC106605018 other downstream 101234 8748943 ~ 8751443 (+)
LOC120561899 LOC104959271 other downstream 112337 8760046 ~ 8776508 (+)
trnay-gua_1 NA other downstream 162642 8810351 ~ 8810439 (+)
trnay-gua_2 NA other downstream 163025 8810734 ~ 8810823 (+)
trnay-gua_3 NA other downstream 163400 8811109 ~ 8811197 (+)

Expression


Co-expression Network