LOC120561652


Basic Information

Item Value
gene id LOC120561652
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 3478539 ~ 3480074 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639628.1
ACGCAGCAGCAATCAGCCTCACTGGACTTActTTTCAGATCAGTTTATGCCTTTGCATCTTGCTGTTCCAGTTTCAAGAAGTTAAGGAAGATAACTGGAGATGTGATAACGATACCAGaagactgagaagaaACTGCCCCTCATTAGAAAGATGATGGAGACCACATTTCCCCTACGCCGACAGACCATAGTGATGTCCTGTGATTCTTACTCATTtggctgatatttttgctttattaatgtgtgcaagattcttcaaattgaactgttttttttaataagtgttgttgctgtattctACTCTGGCTGTTATTTCTATGTAGTTGTATGCAGAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639628.1 True 336 lncRNA 0.39 3 3478539 3480074

Neighbor

gene id symbol gene type direction distance location
prss35 prss35,LOC104949834 coding upstream 309365 3163016 ~ 3169174 (+)
prdm13 prdm13,LOC102783984 coding upstream 631593 2840205 ~ 2846946 (+)
zgc:172323 LOC104953825,LOC100700401,LOC102293068,LOC102783698,LOC101479285,LOC103354301 coding upstream 644198 2828827 ~ 2834341 (+)
tstd3 NA coding upstream 650214 2823361 ~ 2828325 (+)
pou3f2b pou3f2,LOC102224898,LOC107378829 coding upstream 884417 2592145 ~ 2594122 (+)
tent5aa LOC104929946,LOC103354291,LOC100698511,LOC103388593 coding downstream 19113 3499187 ~ 3503888 (+)
ebag9 ebag9 coding downstream 374072 3854146 ~ 3872900 (+)
LOC120561648 LOC106523394 coding downstream 408941 3889015 ~ 3890058 (+)
seh1l seh1l coding downstream 983363 4463437 ~ 4472667 (+)
cep192 cep192 coding downstream 993932 4474006 ~ 4571309 (+)
LOC120561650 NA non-coding upstream 43477 3427224 ~ 3435062 (+)
G70310 NA non-coding upstream 62590 3415457 ~ 3415949 (+)
G70209 NA non-coding upstream 316270 3161984 ~ 3162269 (+)
G70208 NA non-coding upstream 317140 3160017 ~ 3161399 (+)
G70202 NA non-coding upstream 386167 3081222 ~ 3092372 (+)
G70403 NA non-coding downstream 136989 3617063 ~ 3617269 (+)
G70440 NA non-coding downstream 303757 3783831 ~ 3784168 (+)
G70466 NA non-coding downstream 446618 3926692 ~ 3927045 (+)
LOC120561653 NA non-coding downstream 557857 4037931 ~ 4039348 (+)
G70495 NA non-coding downstream 600843 4080917 ~ 4081209 (+)
ibtk ibtk,LOC102788528 other upstream 3228 3441506 ~ 3475311 (+)
ube3d ube3d,LOC102787972 other upstream 110605 3332968 ~ 3367934 (+)
G70115 NA other upstream 763138 2713437 ~ 2715401 (+)
iqcg NA other upstream 2169738 1298452 ~ 1308801 (+)
G69701 NA other upstream 2413252 1057234 ~ 1065287 (+)
G70338 NA other downstream 53810 3533884 ~ 3535062 (+)
LOC120561848 NA other downstream 145864 3625938 ~ 3627681 (+)
LOC120561654 NA other downstream 154899 3634973 ~ 3635830 (+)
G70460 NA other downstream 394371 3874445 ~ 3893927 (+)
gdf6a gdf6,gdf6a,LOC104931979,LOC100693017,LOC102300803,LOC101484183,LOC102790179,LOC101068913 other downstream 429202 3909276 ~ 3916418 (+)

Expression


Co-expression Network