LOC120561670


Basic Information

Item Value
gene id LOC120561670
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 25335016 ~ 25335958 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639632.1
tgtgtgtgtgtgtgtgtgtgtttcttcaagcccatgtgtgtttgtttatgcaaacctgtcatcatcatcattgtgcaggtgtgtttatGCTGCCACTGTCTCTCAGGCCTCACTGTCACAGTCATAACAGTATCTCATGATATGACAACGTTAGGTGTCAGTCAAAAAGTCAGTTAGTATGCTGGGTGTGATGGTGTGGATGAACACCTGATATATCGGAGGAATGTGACAGATGGATGCTACTCTGATGTGAACttcatgtttattttgtgtctgttgcaGGATTACCCTGCAAAGCCAGCTGACACATTTTTAGTTTGCTTACTCTTTTCTGGCAAGGCTTAGTGGACATTTGCTTGGGACAGGCATCATTTCAGATAGCCCGCACAATAGATGATTTACGAGTGTAACGTTGAATGTCCAGTCCAACATGCCAGCTGTTCTTAAACGTTGTTAATTTTCTTCCAAGCTATCCCTAGATGTTGGTTTCTGACTCAGTTTATGTGAGAAAATTAAATGGCAGTTCAAGGTTTTGAGTTTTGAGTCATGACGGAACTCTTGTAGCGAAAACTGAGCTTGCAAGATTTAAGCTGGCTTCTTCGACTCCAGGATTACACCCTCCTCTGGGCTCAGAAGAATCTCTTAGACTTATTACACCCCTCTAAAACCCTGGTGAATAAACTTAAAACTGCATCACCATCAAGCTAAAACCATGGCTGTTTATCTGCAGAAACTGATAAGTTAACTACAACTTTGATGTGTTGTCTCTGGTGTGTGGTGCTGAATTAGTCCGAGCAAAATGATATTTGAAAATTCTTGTTATATTTGTTGACTGCAAATAAAGAAGCcttaatttctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639632.1 True 859 lncRNA 0.41 2 25335016 25335958

Neighbor

gene id symbol gene type direction distance location
lipeb lipe coding upstream 41746 25262018 ~ 25293270 (+)
cd79a NA coding upstream 73113 25258791 ~ 25261903 (+)
arhgef1b arhgef1 coding upstream 76542 25207990 ~ 25258474 (+)
erfl1 LOC103363343,LOC103477917,LOC107083533,LOC106960039,LOC103139231 coding upstream 130810 25154290 ~ 25204206 (+)
LOC120561986 LOC103363344 coding upstream 223259 25104944 ~ 25111757 (+)
LOC120561668 LOC105939654 coding downstream 12162 25348120 ~ 25357859 (+)
LOC120561675 trypsase,LOC103389000 coding downstream 24800 25360758 ~ 25362313 (+)
LOC120561673 LOC108235490,LOC102233864,LOC107379681 coding downstream 32371 25368329 ~ 25371056 (+)
bcl3 bcl3 coding downstream 64282 25400240 ~ 25422572 (+)
ddx61 LOC104962676,LOC102800138,LOC100698984,LOC101488107,LOC104927343 coding downstream 86892 25422850 ~ 25436271 (+)
G75943 NA non-coding upstream 190212 25144579 ~ 25144804 (+)
G75942 NA non-coding upstream 190742 25144058 ~ 25144274 (+)
G75941 NA non-coding upstream 219259 25115556 ~ 25115757 (+)
G75804 NA non-coding upstream 397798 24874004 ~ 24937218 (+)
G75803 NA non-coding upstream 510251 24823026 ~ 24824765 (+)
G75977 NA non-coding downstream 10305 25346263 ~ 25347216 (+)
G76055 NA non-coding downstream 206441 25542399 ~ 25596454 (+)
G76083 rps19,LOC106942871,LOC103477840,LOC102304814,LOC102192408 non-coding downstream 270192 25606150 ~ 25617478 (+)
G76089 NA non-coding downstream 288472 25624430 ~ 25701085 (+)
G76109 NA non-coding downstream 466554 25802512 ~ 25804190 (+)
LOC120561858 NA other upstream 338707 24915254 ~ 24996309 (+)
grik5 grik5 other upstream 449643 24806289 ~ 24885373 (+)
dedd1 dedd2 other upstream 800740 24520735 ~ 24534276 (+)
G75644 NA other upstream 898197 24435139 ~ 24436819 (+)
lpcat3 lpcat3 other upstream 1261318 24056437 ~ 24073698 (+)
LOC120561674 LOC104943405,LOC103477911,LOC108235491,LOC108235490,LOC102233864,LOC107379681 other downstream 38249 25374207 ~ 25380798 (+)
apoc1 NA other downstream 155826 25491784 ~ 25493262 (+)
apoc2 NA other downstream 166642 25502600 ~ 25504052 (+)
taf12 taf12 other downstream 456860 25792818 ~ 25795519 (+)
G76192 NA other downstream 803943 26139901 ~ 26142627 (+)

Expression


Co-expression Network