LOC120561760



Basic Information


Item Value
gene id LOC120561760
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 34558496 ~ 34559547 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XR_005639643.1
CAGTGTAAAGCTTGTCAGGAGGACTGGTTACTCAACGAGTCTAACTGCTATGAGATTCATGATGCTGATCCTTCTAATCAGAAAACCTGGGAAGAAGCTTGAGTAAACTGCAGCGGGTATAACGCAGATTTTGTTATTGTACACAGTCAAGAGGAAAAGGATATGATCAATGGTTACAGCTGGGGTAACCAAGATGAGAGTGGATACTGGATTGGCCTGAGAGTTGAAAATGGGAGATGGAAGTGGATTGATGGAAGTGATCTGGCTGTAGACTTCTGGATAGGACCTCCCTTTGACGGTCACTGTGCAGTTTCTGTCCAGGACGTAGGATGGAGATCAGTGAGCTGTGCTGACAGAAAACGATGGATCTGCAAAAAGAAGGCTTTATGTGTTTAAACACTGCAGTCATATTCAGCATGATAATATCAACTGGCTTATACATATGAAACTATGAAAACTTTcaaagctgtttgtgtgtgtctgaaaaaaCAGACACTTAGATTAAATGTAATTGAGTTAGATATTTGGATTATAGAGGTATGGTGTGTCTGACTACTGACACCAACATTTAAGAAAATACAGTGACTGGCCTGAAGGGGCACTAAACTGTTAATTATCAATAACTATAAATAtgattttttcttcttcgttAGAGTTGCAATGCCAGAGACCGGTTAGTAGAGGATTTTTGGCAATGCTTATATTTCCTGTttctatgacattttattttgttgctcCTGATTGGCCAACAGAGGGCGCTGCATCACTTGTTCTCAACAGAATGTTCCAGAGTCTGTTTCAATATTTCCTTGTACAGCTGATGGTTAAGTGTTATCTTTCTATCTAGAAGCAGTTTCATATTTTAGTCTATTACATTGAATAAAGTGTATGCCAGATA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005639643.1 True 898 lncRNA 0.39 3 34558496 34559547

Neighbor


gene id symbol gene type direction distance location
LOC120561740 NA coding downstream 28443 34517477 ~ 34530053 (-)
LOC120561750 NA coding downstream 72734 34482786 ~ 34485762 (-)
LOC120561755 NA coding downstream 171567 34386412 ~ 34386929 (-)
LOC120561739 NA coding downstream 178203 34369691 ~ 34380293 (-)
LOC120561754 NA coding downstream 189354 34364447 ~ 34369142 (-)
LOC120561738 NA coding upstream 26080 34585627 ~ 34600039 (-)
mef2d mef2d,LOC103369254,LOC103388711 coding upstream 75194 34634741 ~ 34778605 (-)
LOC120562852 NA coding upstream 248283 34807830 ~ 34809849 (-)
rhbg rhbg2a,LOC106605319 coding upstream 354774 34914321 ~ 34932785 (-)
isg20l2 isg20l2 coding upstream 474336 35033883 ~ 35043980 (-)
LOC120561769 NA non-coding downstream 63737 34493956 ~ 34494759 (-)
LOC120561767 NA non-coding downstream 84721 34456746 ~ 34473775 (-)
G78318 NA non-coding downstream 88978 34468899 ~ 34469518 (-)
LOC120561765 NA non-coding downstream 94033 34462062 ~ 34464463 (-)
LOC120561764 NA non-coding downstream 111986 34446062 ~ 34446510 (-)
G78389 NA non-coding upstream 284742 34844289 ~ 34850430 (-)
LOC120562743 NA non-coding upstream 309840 34869387 ~ 34888246 (-)
G78406 NA non-coding upstream 350811 34910358 ~ 34910573 (-)
G78446 NA non-coding upstream 467831 35027378 ~ 35027581 (-)
G78448 NA non-coding upstream 471095 35030642 ~ 35030846 (-)
G78321 NA other downstream 65301 34492346 ~ 34493195 (-)
LOC120561748 NA other downstream 217515 34339177 ~ 34340981 (-)
LOC120561737 NA other downstream 235481 34316812 ~ 34323015 (-)
LOC120561747 NA other downstream 284844 34261526 ~ 34273652 (-)
LOC120561744 NA other downstream 426064 34129538 ~ 34132432 (-)
bcan NA other upstream 415277 34974824 ~ 35004333 (-)
G78444 NA other upstream 452556 35012103 ~ 35014522 (-)
G78496 NA other upstream 614319 35173866 ~ 35177239 (-)
plekhf2 plekhf2 other upstream 708810 35268357 ~ 35309397 (-)
G78733 LOC104935873 other upstream 1465184 36024731 ~ 36026542 (-)

Expression



Co-expression Network