LOC120561796


Basic Information

Item Value
gene id LOC120561796
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 7656163 ~ 7660085 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639658.1
AACCGCGAGAGCGCGCACAACGAAACGACAGTTTACAGTGATTCAGGTTTTTTACCCGTGGCTTTTACTCCACTAAAGAGGAAAATGCCATTTACTTTTGCCCAGTCTGTGCAAAAGTGGCTGCGCTATGCGCCAGACCGGGCAGGAGGGACTGGACGACAAACCAATCAGACGTCAGAGGACCATGAACTGTAAATTTGCTAAAGaggacaaataatgaaataagaggctaataaaatgaatttgtttttcCTTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639658.1 True 258 lncRNA 0.44 2 7656163 7660085

Neighbor

gene id symbol gene type direction distance location
fzd1 fzd1,LOC104958298,LOC104925482 coding upstream 357921 7295946 ~ 7298242 (+)
LOC120562880 NA coding upstream 626402 7004604 ~ 7029761 (+)
tsnare1 tsnare1,LOC101472715 coding upstream 850563 6636852 ~ 6805600 (+)
LOC120561876 NA coding upstream 1841521 5812877 ~ 5814642 (+)
LOC120562247 NA coding upstream 2298869 5355807 ~ 5357294 (+)
LOC120561797 NA coding downstream 5153 7665238 ~ 7707591 (+)
LOC120561799 NA coding downstream 71741 7731826 ~ 7741034 (+)
rbm42 rbm42 coding downstream 107674 7767759 ~ 7783482 (+)
LOC120563115 LOC104936139,LOC100707989,LOC101475232,LOC102313234 coding downstream 225612 7885697 ~ 7904575 (+)
gpd1l gpd1l,LOC103034694,LOC108434205,LOC107600618 coding downstream 369597 8029682 ~ 8046678 (+)
G71091 NA non-coding upstream 88749 7567107 ~ 7567414 (+)
G71090 NA non-coding upstream 96764 7542449 ~ 7559399 (+)
LOC120562239 NA non-coding upstream 117921 7537628 ~ 7538242 (+)
G71082 NA non-coding upstream 134783 7510789 ~ 7521380 (+)
G71081 NA non-coding upstream 136122 7509226 ~ 7520041 (+)
G71150 NA non-coding downstream 82547 7742632 ~ 7744001 (+)
G71148 NA non-coding downstream 136256 7796341 ~ 7802015 (+)
G71176 NA non-coding downstream 211432 7871517 ~ 7875600 (+)
G71204 osbpl10 non-coding downstream 312777 7972862 ~ 7980906 (+)
G71200 NA non-coding downstream 386865 8046950 ~ 8047669 (+)
znrf2b znrf2 other upstream 155981 7456767 ~ 7500182 (+)
cdk14 cdk14 other upstream 363728 7039163 ~ 7292435 (+)
G70894 NA other upstream 1695309 5960455 ~ 5960854 (+)
si:ch211-198c19.1 NA other upstream 2061263 5591199 ~ 5594900 (+)
LOC120562244 zdhhc3,LOC103364625,LOC101488043,LOC107102987 other upstream 2189073 5336214 ~ 5467090 (+)
G71147 LOC103388722,LOC104941093,LOC103369890 other downstream 70937 7731022 ~ 7801380 (+)
G71309 NA other downstream 461516 8121601 ~ 8122239 (+)
ano10a ano10 other downstream 623295 8283380 ~ 8309744 (+)
G71470 rrp15,LOC106584165,LOC106605018 other downstream 1088858 8748943 ~ 8751443 (+)
LOC120561899 LOC104959271 other downstream 1099961 8760046 ~ 8776508 (+)

Expression


Co-expression Network