Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120562088 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053118.1 |
| NCBI id | CM020915.1 |
| chromosome length | 43092710 |
| location | 3088979 ~ 3090692 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005639687.1 | True | 546 | lncRNA | 0.45 | 3 | 3088979 | 3090692 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| prdm13 | prdm13,LOC102783984 | coding | upstream | 242033 | 2840205 ~ 2846946 (+) |
| zgc:172323 | LOC104953825,LOC100700401,LOC102293068,LOC102783698,LOC101479285,LOC103354301 | coding | upstream | 254638 | 2828827 ~ 2834341 (+) |
| tstd3 | NA | coding | upstream | 260654 | 2823361 ~ 2828325 (+) |
| pou3f2b | pou3f2,LOC102224898,LOC107378829 | coding | upstream | 494857 | 2592145 ~ 2594122 (+) |
| LOC120561851 | LOC103355401,LOC106950884 | coding | upstream | 499285 | 2318631 ~ 2589694 (+) |
| prss35 | prss35,LOC104949834 | coding | downstream | 72324 | 3163016 ~ 3169174 (+) |
| tent5aa | LOC104929946,LOC103354291,LOC100698511,LOC103388593 | coding | downstream | 408495 | 3499187 ~ 3503888 (+) |
| ebag9 | ebag9 | coding | downstream | 763454 | 3854146 ~ 3872900 (+) |
| LOC120561648 | LOC106523394 | coding | downstream | 798323 | 3889015 ~ 3890058 (+) |
| seh1l | seh1l | coding | downstream | 1372745 | 4463437 ~ 4472667 (+) |
| LOC120562087 | NA | non-coding | upstream | 6063 | 3081205 ~ 3082916 (+) |
| LOC120562089 | NA | non-coding | upstream | 135158 | 2952884 ~ 2953821 (+) |
| G70178 | NA | non-coding | upstream | 171816 | 2916869 ~ 2917163 (+) |
| G70133 | NA | non-coding | upstream | 334035 | 2750377 ~ 2754944 (+) |
| G70127 | NA | non-coding | upstream | 345533 | 2740969 ~ 2743446 (+) |
| G70208 | NA | non-coding | downstream | 69325 | 3160017 ~ 3161399 (+) |
| G70209 | NA | non-coding | downstream | 71292 | 3161984 ~ 3162269 (+) |
| G70310 | NA | non-coding | downstream | 324765 | 3415457 ~ 3415949 (+) |
| LOC120561650 | NA | non-coding | downstream | 336532 | 3427224 ~ 3435062 (+) |
| LOC120561652 | NA | non-coding | downstream | 387847 | 3478539 ~ 3480074 (+) |
| G70115 | NA | other | upstream | 373578 | 2713437 ~ 2715401 (+) |
| iqcg | NA | other | upstream | 1780178 | 1298452 ~ 1308801 (+) |
| G69701 | NA | other | upstream | 2023692 | 1057234 ~ 1065287 (+) |
| LOC120561945 | znf706,LOC107103982,LOC102223041,LOC103478835 | other | upstream | 2897282 | 184854 ~ 191697 (+) |
| ube3d | ube3d,LOC102787972 | other | downstream | 242276 | 3332968 ~ 3367934 (+) |
| ibtk | ibtk,LOC102788528 | other | downstream | 350814 | 3441506 ~ 3475311 (+) |
| G70338 | NA | other | downstream | 443192 | 3533884 ~ 3535062 (+) |
| LOC120561848 | NA | other | downstream | 535246 | 3625938 ~ 3627681 (+) |
| LOC120561654 | NA | other | downstream | 544281 | 3634973 ~ 3635830 (+) |
