LOC120562414


Basic Information

Item Value
gene id LOC120562414
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 40910377 ~ 40911188 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639781.1
GTGTAACTTGAGAGATAGAAATGCAATTACTACGGTATATTGGATGTGACAGAAGGTTCAAAGGAgaataatttcatatttaatttaatattgtattaggCTTTTAATTTAGGTTGATTTCAGCATAGAGAGTGAATAAACTACCCAACCATGAAGACCATCTTTCAGCTGGGGAGGCTACACTATGAGTCTAAGAGAGGTTATCGGCGCTGCAGAATTCCTTTATCCTGTGGAAAATGGAAGAGCTCATAATCACAGaCACCAAGAACCTGATGGCGAAGGCGGCTGCCATGGACCAGCATGGATTGGAGCTCAGGTTATGGTTACCTGGGTGGGCACCCAGAGGAGCAGCAAGTCTGAAAGAATTCCTAGCAGAGAAAGTTAAGACTGTCCTTAAAAAGAGGAGGCGCTCGTCATCGATGGAGGCTGAGCTCAAAGCAAACTGCAAAAAAGGTTACGGATTCATTtgcttgttttatttaattattttaaagattgttttttggACCTTTTTCCCCCTATCACAGTGGCAGTGGATAGTCAttaaagggggagagagatgggggacgacacgcagcaaagggccgctgcacgttcagccaacatggggcgaacgctcccaTGGTTgcgctagaggccgccccgaataatttgcttgtttttgttaTGCTAAGTGTTGTACATATAGTGACTgttcattttaataataaaaaaataataatttaa

Function

GO:

id name namespace
GO:0009072 aromatic amino acid family metabolic process biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639781.1 True 726 lncRNA 0.42 2 40910377 40911188

Neighbor

gene id symbol gene type direction distance location
LOC120562403 NA coding downstream 21623 40884121 ~ 40888754 (-)
LOC120562399 NA coding downstream 93822 40811235 ~ 40816555 (-)
pmvk pmvk coding downstream 423031 40480066 ~ 40487346 (-)
tmem79b NA coding downstream 546193 40354634 ~ 40364184 (-)
LOC120562375 NA coding downstream 658223 40245385 ~ 40252154 (-)
LOC120562505 LOC100690881,LOC102207812,LOC101474950 coding upstream 488622 41399810 ~ 41409787 (-)
myo1eb LOC104937078,LOC101474664,LOC102208361,LOC100691416,LOC102308324 coding upstream 703721 41614909 ~ 41660714 (-)
selenbp1 selenbp1 coding upstream 1092664 42003852 ~ 42047544 (-)
LOC120562508 NA coding upstream 1140787 42051975 ~ 42057548 (-)
LOC120562764 NA coding upstream 1708715 42619903 ~ 42623838 (-)
G80253 NA non-coding downstream 35017 40861655 ~ 40875360 (-)
G80256 NA non-coding downstream 35652 40871330 ~ 40874725 (-)
G80252 NA non-coding downstream 41536 40860386 ~ 40868841 (-)
LOC120562421 NA non-coding downstream 57507 40852298 ~ 40852870 (-)
G80246 NA non-coding downstream 99596 40809822 ~ 40810781 (-)
G80497 NA non-coding upstream 73862 40985050 ~ 40985350 (-)
G80507 NA non-coding upstream 185824 41097012 ~ 41097725 (-)
G80510 NA non-coding upstream 245810 41156998 ~ 41183899 (-)
G80512 NA non-coding upstream 246776 41157964 ~ 41186230 (-)
G80508 NA non-coding upstream 275265 41186453 ~ 41254217 (-)
LOC120562415 NA other downstream 144910 40678343 ~ 40765467 (-)
G80186 NA other downstream 412781 40492323 ~ 40497596 (-)
G80129 NA other downstream 602854 40222367 ~ 40307523 (-)
LOC120562372 NA other downstream 675714 40203039 ~ 40234663 (-)
G80046 NA other downstream 1048829 39779384 ~ 39861548 (-)
G80488 NA other upstream 104662 41015850 ~ 41017192 (-)
G80498 NA other upstream 192055 41103243 ~ 41104094 (-)
LOC120562506 NA other upstream 501765 41412953 ~ 41421025 (-)
LOC120562392 LOC103132156,LOC108243373 other upstream 521853 41433041 ~ 41605388 (-)
LOC120562507 LOC105890369,LOC107379007,LOC105018870,LOC105012700,LOC103477466,LOC103369594 other upstream 726949 41638137 ~ 41998854 (-)

Expression


Co-expression Network