LOC120562420



Basic Information


Item Value
gene id LOC120562420
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 41539010 ~ 41539592 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XR_005639786.1
CACACCCACACTGCACCACAACATTGCACCACATTGCACTACATAACACATACATAACAAAATCAACAGTTCTTTTAAGaacttctctctccctctatgtCTGTCCTTCTCAGAGTATGCCTGAGAGAAATAAAGAAGgtgTCCCGCTGCAGTACCCCCTGCTATATGGAGCCCCACATGCTGGGCTGGAGGCCTCTCATGCTGTCCACGGTCGAGCCCAGGCTGATTTACTTCCTCTTCCCGAGGGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005639786.1 True 248 lncRNA 0.50 3 41539010 41539592

Neighbor


gene id symbol gene type direction distance location
LOC120562404 NA coding upstream 37351 41500185 ~ 41501659 (+)
LOC120562390 NA coding upstream 219306 41239083 ~ 41319704 (+)
LOC120562388 NA coding upstream 244629 41220084 ~ 41294381 (+)
LOC120562391 NA coding upstream 364164 41163743 ~ 41174846 (+)
LOC120562397 NA coding upstream 389008 41147864 ~ 41150002 (+)
LOC120562396 NA coding downstream 1498 41541090 ~ 41545594 (+)
LOC120562406 NA coding downstream 11499 41551091 ~ 41576503 (+)
LOC120561585 NA coding downstream 187974 41727566 ~ 41850702 (+)
LOC120562755 NA coding downstream 987904 42527496 ~ 42529482 (+)
LOC120562768 NA coding downstream 1123926 42663518 ~ 42666003 (+)
LOC120562422 NA non-coding upstream 8946 41529063 ~ 41530064 (+)
G80351 NA non-coding upstream 35770 41502345 ~ 41503240 (+)
G80348 NA non-coding upstream 46357 41491844 ~ 41492653 (+)
G80346 NA non-coding upstream 52941 41484572 ~ 41486069 (+)
G80339 NA non-coding upstream 105463 41433046 ~ 41433547 (+)
G80364 NA non-coding downstream 74508 41614100 ~ 41615261 (+)
G80365 NA non-coding downstream 77317 41616909 ~ 41617366 (+)
G80363 NA non-coding downstream 98546 41638138 ~ 41697410 (+)
G80376 NA non-coding downstream 110915 41650507 ~ 41650950 (+)
LOC120561593 NA non-coding downstream 172063 41711655 ~ 41717691 (+)
G80337 NA other upstream 82652 41421356 ~ 41456358 (+)
LOC120562389 NA other upstream 145784 41377447 ~ 41393226 (+)
G80320 NA other upstream 178804 41356480 ~ 41360206 (+)
polr3glb NA other upstream 352065 41156474 ~ 41186945 (+)
LOC120562400 NA other upstream 526391 41007967 ~ 41012619 (+)
LOC120561589 NA other downstream 142821 41682413 ~ 41693005 (+)
G80410 NA other downstream 399906 41939498 ~ 42006594 (+)
G80682 NA other downstream 945743 42485335 ~ 42486009 (+)
LOC120562757 LOC104947480 other downstream 993332 42532924 ~ 42539601 (+)
LOC120562767 NA other downstream 1092815 42632407 ~ 42643990 (+)

Expression



Co-expression Network