LOC120562422



Basic Information


Item Value
gene id LOC120562422
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 41529063 ~ 41530064 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XR_005639788.1
CCTCGCTAGATGGAGCACTGCTTCGGGTTCTCACAcgagttaaaaaaaagattgagaaGAAAAGAAGTTGGAGAACCATCCAGAAATCTCTTTTATTTGTCCTGGATTCTCATACTGGAAATCCTTTATTGGTCAGGTCTTTTCATGAGGCGAGCAGAAGTCCCAAAAGCTCCAGTCCTTGAATCATACCAGGTGAACTATTGATCCATAGATGGCGAGCCTTCCAAGGAACAGTGAACCTCCACCACAGCATTCCGGAAGCCTGTGGTAGGGTTGTGTCAGTTGAACAAAGTATAGTTGAACAAACTATACTACCATAGG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005639788.1 True 321 lncRNA 0.44 3 41529063 41530064

Neighbor


gene id symbol gene type direction distance location
LOC120562404 NA coding upstream 27404 41500185 ~ 41501659 (+)
LOC120562390 NA coding upstream 209359 41239083 ~ 41319704 (+)
LOC120562388 NA coding upstream 234682 41220084 ~ 41294381 (+)
LOC120562391 NA coding upstream 354217 41163743 ~ 41174846 (+)
LOC120562397 NA coding upstream 379061 41147864 ~ 41150002 (+)
LOC120562396 NA coding downstream 11026 41541090 ~ 41545594 (+)
LOC120562406 NA coding downstream 21027 41551091 ~ 41576503 (+)
LOC120561585 NA coding downstream 197502 41727566 ~ 41850702 (+)
LOC120562755 NA coding downstream 997432 42527496 ~ 42529482 (+)
LOC120562768 NA coding downstream 1133454 42663518 ~ 42666003 (+)
G80351 NA non-coding upstream 25823 41502345 ~ 41503240 (+)
G80348 NA non-coding upstream 36410 41491844 ~ 41492653 (+)
G80346 NA non-coding upstream 42994 41484572 ~ 41486069 (+)
G80339 NA non-coding upstream 95516 41433046 ~ 41433547 (+)
G80318 NA non-coding upstream 126897 41348582 ~ 41402166 (+)
LOC120562420 NA non-coding downstream 8946 41539010 ~ 41539592 (+)
G80364 NA non-coding downstream 84036 41614100 ~ 41615261 (+)
G80365 NA non-coding downstream 86845 41616909 ~ 41617366 (+)
G80363 NA non-coding downstream 108074 41638138 ~ 41697410 (+)
G80376 NA non-coding downstream 120443 41650507 ~ 41650950 (+)
G80337 NA other upstream 72705 41421356 ~ 41456358 (+)
LOC120562389 NA other upstream 135837 41377447 ~ 41393226 (+)
G80320 NA other upstream 168857 41356480 ~ 41360206 (+)
polr3glb NA other upstream 342118 41156474 ~ 41186945 (+)
LOC120562400 NA other upstream 516444 41007967 ~ 41012619 (+)
LOC120561589 NA other downstream 152349 41682413 ~ 41693005 (+)
G80410 NA other downstream 409434 41939498 ~ 42006594 (+)
G80682 NA other downstream 955271 42485335 ~ 42486009 (+)
LOC120562757 LOC104947480 other downstream 1002860 42532924 ~ 42539601 (+)
LOC120562767 NA other downstream 1102343 42632407 ~ 42643990 (+)

Expression



Co-expression Network