LOC120562672



Basic Information


Item Value
gene id LOC120562672
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 37905582 ~ 37911125 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XR_005639805.1
CATTCTTCAGATTTGCATCGTGTCAGAGTTctgctcctcttttttttcatcttcagaCTTTTagatttcaacatttttggacCTTCATTCCTGAAACTTTCTCCACCAGCTCTTCGGTATCCCTCCTGCTGCTGACTCTAGAActcatctctctcctgtcaTTCAGGTATCCCTCCTGTTGCTGACTCTACAActcatctctctcctgtcattcagATGAACATGAAGATCTCTATCTTTGCCAGTgttctgctgctctctgctgctctgaTCTCTGTTGACGGTGCTCGTAAAAAGACACCGTTTGAAATGAACCATATCGCACCGAACATGACTCCTCAACAATGTTACGATAAGATGGTTGGACTCCTTTACTCTAGGGATAGTAATTCCTTCATCAAAGCGCGTATCAGTGTGGTCGGAAATGTGTGTAAAGGAGAAGGAACTCCTGATGGACTTAATTTTATAAGCAAAGACTACTTTGATGTTGTTAAGTGTGTATTGAACCGCACTACTAATCAATACGACGCTATACCCAAACATTGTAAAATTATAATTGCATGTGGTAATTATGAACCTGTTCATTATGTAGGGGAGAGCAACATCTGTCGTTAATCTGTTACTAcgtgatgaatcagagtaatctattactacctgatgatactacctgatgaatcagagtaatctatta

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005639805.1 True 691 lncRNA 0.40 4 37905582 37911125

Neighbor


gene id symbol gene type direction distance location
si:dkey-11p23.7 NA coding downstream 50760 37851161 ~ 37854822 (-)
mrps12 mrps12 coding downstream 175516 37725589 ~ 37730066 (-)
LOC120562468 NA coding downstream 210176 37693717 ~ 37695406 (-)
LOC120562948 NA coding downstream 219969 37682235 ~ 37685613 (-)
LOC120562949 NA coding downstream 230569 37672821 ~ 37675013 (-)
LOC120563013 NA coding upstream 300695 38211820 ~ 38230481 (-)
dcst1 NA coding upstream 318433 38229558 ~ 38250551 (-)
LOC120563006 NA coding upstream 414157 38325282 ~ 38327753 (-)
LOC120563000 NA coding upstream 424359 38335484 ~ 38337715 (-)
LOC120563004 NA coding upstream 432953 38344078 ~ 38346701 (-)
G79463 NA non-coding downstream 5598 37891935 ~ 37899984 (-)
G79448 NA non-coding downstream 39535 37826824 ~ 37866047 (-)
G79443 NA non-coding downstream 74024 37779364 ~ 37831558 (-)
G79433 NA non-coding downstream 107637 37796816 ~ 37797945 (-)
G79441 NA non-coding downstream 146761 37758201 ~ 37758821 (-)
G79478 NA non-coding upstream 113472 38024597 ~ 38024811 (-)
G79479 NA non-coding upstream 123088 38034213 ~ 38034851 (-)
LOC120563195 NA non-coding upstream 134870 38045995 ~ 38050535 (-)
G79483 NA non-coding upstream 146987 38058112 ~ 38058431 (-)
G79486 NA non-coding upstream 170606 38081731 ~ 38087507 (-)
LOC120562472 NA other downstream 108816 37744084 ~ 37796766 (-)
LOC120561551 NA other downstream 386188 37492800 ~ 37519394 (-)
LOC120562574 NA other downstream 670453 37088824 ~ 37235129 (-)
kiaa0319 LOC103370079 other downstream 1010944 36867667 ~ 36894638 (-)
LOC120563186 LOC103369286,LOC103131393,LOC106962355,LOC106910391 other downstream 1157344 36664542 ~ 36748238 (-)
LOC120562474 NA other upstream 47324 37958449 ~ 37971348 (-)
G79484 NA other upstream 152573 38063698 ~ 38221760 (-)
LOC120562477 NA other upstream 229344 38140469 ~ 38205182 (-)
LOC120562482 NA other upstream 407819 38318944 ~ 38324284 (-)
LOC120562485 NA other upstream 605476 38516601 ~ 38522389 (-)

Expression



Co-expression Network