LOC120562710


Basic Information

Item Value
gene id LOC120562710
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 31015133 ~ 31016447 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639812.1
ATGGGACGATGGCACCTGTTCAATCAAGCTCCCTTTCATCTGTCATCAAGTTTCAAAAGTGAAGACTACTGTGAGGATGAAGTTCAAGACTAGAGCTGACATAACCAATCCAGCTACTAACACCCAGATCCTCCAACAGCTGGATGCAGAGCTAAAAAGACATGGATGGACTGACTTCAAGCTGCGATGGAAGATTCAGCCCAAAaagcaggaggaagagaaaCTCACAGAACCTCCATGcttttaaagagcccctattatactcCTTTTCATCTTCATATGTGTACTCTTGTACTCTATAGAATAGGGTTTAcctgctttgatgttcaaacaACATgttatgtttctcatactgcccattgcttCAGCGCCTCCTACTGAAACAGTCAGTTTGAGCTCTTGGCCCGCCTTCCTGAAAAGCCCCGTCTggtctgattggtcagctgccccactctgttgtgattggtcaaccaaattcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639812.1 True 480 lncRNA 0.45 3 31015133 31016447

Neighbor

gene id symbol gene type direction distance location
LOC120562709 NA coding upstream 6736 30988763 ~ 31008397 (+)
nr1d2a LOC103375162 coding upstream 38891 30968581 ~ 30976242 (+)
LOC120562211 ube2e1,LOC106534515,LOC101480162,LOC103357960,LOC100705406 coding upstream 49716 30951233 ~ 30965417 (+)
LOC120562210 LOC103357958,LOC107379173,LOC102233395,LOC103388353,LOC100705137,LOC103477709,LOC106523089 coding upstream 65945 30909030 ~ 30949188 (+)
si:dkey-82o10.4 NA coding upstream 301742 30705031 ~ 30713391 (+)
LOC120561533 rarb,LOC102205684,LOC101478141 coding downstream 8537 31024984 ~ 31044407 (+)
sept7b LOC103370332,LOC107379178 coding downstream 49318 31065765 ~ 31084517 (+)
si:dkey-256h2.1 NA coding downstream 98302 31114749 ~ 31131084 (+)
mios mios coding downstream 146972 31163419 ~ 31175385 (+)
LOC120561996 LOC102798925,LOC101475373 coding downstream 160342 31176789 ~ 31201260 (+)
LOC120562708 NA non-coding upstream 26400 30978327 ~ 30988733 (+)
G77399 NA non-coding upstream 38052 30976741 ~ 30977081 (+)
G77260 NA non-coding upstream 612429 30398276 ~ 30402704 (+)
LOC120562235 NA non-coding upstream 796530 30216748 ~ 30218603 (+)
LOC120562092 NA non-coding upstream 894037 30118008 ~ 30121096 (+)
G77555 NA non-coding downstream 497689 31514136 ~ 31514561 (+)
G77554 NA non-coding downstream 501316 31517763 ~ 31518618 (+)
G77558 NA non-coding downstream 508736 31525183 ~ 31525583 (+)
G77591 NA non-coding downstream 594611 31611058 ~ 31611311 (+)
G77592 NA non-coding downstream 596034 31612481 ~ 31614315 (+)
rab5ab rab5a,LOC104947906,LOC103388351,LOC105936747,LOC100704868,LOC101078239,LOC104931780 other upstream 283524 30687338 ~ 30731609 (+)
LOC120562443 NA other upstream 654545 30351495 ~ 30360588 (+)
G77239 NA other upstream 890495 30123702 ~ 30124638 (+)
rgl2 LOC101463702,LOC100700084,LOC102303531,LOC102796597 other upstream 905588 30073937 ~ 30109545 (+)
G77028 LOC104942601 other upstream 1602720 29404008 ~ 29412413 (+)
G77447 NA other downstream 118382 31134829 ~ 31136146 (+)
G77682 tbx20 other downstream 959871 31976318 ~ 31979909 (+)
LOC120561717 NA other downstream 1388686 32405133 ~ 32421472 (+)
G77888 NA other downstream 2083966 33100413 ~ 33101534 (+)
bmper bmper other downstream 2809640 33826087 ~ 33879132 (+)

Expression


Co-expression Network