LOC120562732


Basic Information

Item Value
gene id LOC120562732
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 19453769 ~ 19456616 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639814.1
gatggctgtgtctcatgtgaccttgttatttgtacacactgtgactatacaaatcacaacatgtaaataggaaaatgttggcattattttgtcgcTTATTGGGAGCATTGAGCTAGAtggagttacgacacgcacggagatgagaaggACAATAAGGTACAGCTTCATCTTGCCAGTGATGGCGGCAATGACTACAGAGAAGCACCAGgtgaaggttcactgagaggcagcctctcttttgcaggaacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639814.1 True 249 lncRNA 0.45 3 19453769 19456616

Neighbor

gene id symbol gene type direction distance location
LOC120561621 LOC105018833 coding upstream 7652 19440837 ~ 19446117 (+)
slc6a19b LOC104965566 coding upstream 13536 19434690 ~ 19440233 (+)
rxrbb LOC104965568,LOC103368225,LOC101470553,LOC100711502 coding upstream 114055 19328950 ~ 19339714 (+)
LOC120563155 NA coding upstream 173147 19278315 ~ 19280622 (+)
LOC120562959 NA coding upstream 184000 19245358 ~ 19269769 (+)
LOC120562733 LOC100705529,LOC103366949,LOC102296000 coding downstream 2939 19459555 ~ 19477316 (+)
sp8b sp8,LOC101158882,LOC104926695,LOC101468530,LOC107378685 coding downstream 120936 19577552 ~ 19582754 (+)
macc1 macc1 coding downstream 133487 19590103 ~ 19595355 (+)
twist1b twist1,LOC100712142,LOC103366955 coding downstream 155130 19611746 ~ 19613152 (+)
ankrd28b ankrd28 coding downstream 218527 19675143 ~ 19693798 (+)
G73606 NA non-coding upstream 133721 19319438 ~ 19320048 (+)
G73586 csnk2b,LOC102207154,LOC106573472,LOC101175345,LOC104925497,LOC102778826 non-coding upstream 177253 19272727 ~ 19276516 (+)
LOC120562631 fxyd7,LOC103388498 non-coding upstream 290965 19159464 ~ 19162804 (+)
LOC120562629 NA non-coding upstream 294751 19158475 ~ 19159018 (+)
LOC120562630 NA non-coding upstream 295400 19148521 ~ 19158369 (+)
LOC120562701 NA non-coding downstream 157887 19614503 ~ 19625611 (+)
G73776 hdac9 non-coding downstream 178257 19634873 ~ 19639459 (+)
G73836 NA non-coding downstream 363619 19820235 ~ 19820591 (+)
G73871 NA non-coding downstream 562493 20019109 ~ 20052006 (+)
G73881 NA non-coding downstream 584255 20040871 ~ 20046380 (+)
si:ch211-254p10.2 LOC102209663,LOC101158134,LOC102295699,LOC101064473 other upstream 486 19447167 ~ 19453283 (+)
hcst LOC104925504,LOC104961397 other upstream 261667 19190020 ~ 19192102 (+)
G73570 LOC103371659 other upstream 294774 19148613 ~ 19158995 (+)
kmt2bb kmt2b other upstream 591811 18833245 ~ 18861958 (+)
proser3 NA other upstream 625081 18819201 ~ 18828688 (+)
G73779 hdac9 other downstream 190359 19646975 ~ 19649511 (+)
LOC120561838 tppp other downstream 736074 20192690 ~ 20209327 (+)
si:ch211-257p13.3 kifc3,LOC102783047 other downstream 757972 20214588 ~ 20226991 (+)
gra NA other downstream 865714 20322330 ~ 20325961 (+)
glipr2l glipr2 other downstream 1143707 20600323 ~ 20605165 (+)

Expression


Co-expression Network