LOC120562769


Basic Information

Item Value
gene id LOC120562769
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 42719416 ~ 42720854 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639825.1
CCTCATGGATTTAGTCTCTGCTTTCTGCTTCTGTTGTTAGCTTGTTGTCGTACTTTTGTCAAGAAGTCTGTTCCTGTGCCAGCTGTTCCTGTGGTCCTGGTATCTTCCCTGTGATTGGACAGTCATCAGCTTACATATCCTCCAACCACTTCCCTCCTTCTGTCTGTTGGAGGATATTAGAGTTCTGCTCTTCATCTTCAGACTTTTTGCATTTTAGATTTTTACcttttctacatttttggaCTTTCGTACCTGGAACTTTCTTCTTCAACTCTGAGATAAACATGAAGATGTCTGTCTTTGCCTGTGTTCTGCTGATCTCTGCTGTCGAGATCTCTGTGGACGGGGAAACTCCAGCTGAAAAGTTCAAGAGACAGCATATCAACAAGGACATGGATCCTAAACACTGTGACGCTGTGATAAAGGAGAGAAAAATCCATCAAAACAATAGGGCTTTTTGTAAGAAGGAGAACACCTTCATCAGTGCGAGTTATGGCGTAGTTAAAAAGGTCTGTGAGAAGGAAGGAGAGCCATATCCAAATGATAGAAATCTGAGAATCAGCCTTAACTCGTTCAGAGTTGTTAATTGCAAATGCAAGGACAACATGAGGCCTCCCAACTGTGGCTGCAAAGGCTCTCGTCCCAACCTGAGAATTGTAATCGGTTGTGACAACAATGATAATCCAGTTCACTATCAAGAAGGTCTGTACATTACCTCCCTGAATGAGACTAAACTGTTTCTACCTGATGAATCGGAGTAAtttgttactacctgatgaatcagtaACTTAATACACATGTGACAGTTTAACTCTGGGTCTGTTTTTAATGCTGTCATGTTAACTGATTTATAAAGATGATGAAAATAAAGTGGGTGACAACTGAGA

Function

GO:

id name namespace
GO:0004518 nuclease activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639825.1 True 887 lncRNA 0.41 3 42719416 42720854

Neighbor

gene id symbol gene type direction distance location
LOC120562768 NA coding upstream 53413 42663518 ~ 42666003 (+)
LOC120562755 NA coding upstream 189934 42527496 ~ 42529482 (+)
LOC120561585 NA coding upstream 868714 41727566 ~ 41850702 (+)
LOC120562406 NA coding upstream 1142913 41551091 ~ 41576503 (+)
LOC120562396 NA coding upstream 1173822 41541090 ~ 41545594 (+)
LOC120562762 LOC104963449 coding downstream 43549 42764403 ~ 42768664 (+)
LOC120562761 LOC104963449 coding downstream 66855 42787709 ~ 42800596 (+)
LOC120562763 LOC106675675,LOC106675676 coding downstream 104744 42825598 ~ 42831659 (+)
LOC120562760 LOC103358480 coding downstream 186162 42907016 ~ 42912785 (+)
G80714 NA non-coding upstream 41552 42677376 ~ 42677864 (+)
G80711 NA non-coding upstream 96811 42617660 ~ 42622605 (+)
LOC120562770 NA non-coding upstream 143931 42574061 ~ 42575485 (+)
G80695 NA non-coding upstream 157794 42561316 ~ 42561622 (+)
G80473 NA non-coding upstream 240352 42362740 ~ 42479064 (+)
G80719 NA non-coding downstream 19972 42740826 ~ 42758626 (+)
LOC120562780 NA non-coding downstream 58101 42778955 ~ 42780523 (+)
LOC120562781 NA non-coding downstream 121721 42842575 ~ 42845934 (+)
G80732 NA non-coding downstream 129743 42850597 ~ 42955526 (+)
LOC120562773 NA non-coding downstream 135583 42856437 ~ 42863102 (+)
LOC120562767 NA other upstream 75426 42632407 ~ 42643990 (+)
LOC120562757 LOC104947480 other upstream 179815 42532924 ~ 42539601 (+)
G80682 NA other upstream 233407 42485335 ~ 42486009 (+)
G80410 NA other upstream 712822 41939498 ~ 42006594 (+)
LOC120561589 NA other upstream 1026411 41682413 ~ 41693005 (+)
LOC120562772 NA other downstream 62641 42783495 ~ 42786405 (+)

Expression


Co-expression Network