LOC120562770


Basic Information

Item Value
gene id LOC120562770
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 42574061 ~ 42575485 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639826.1
CCTCATGGATTTAGTCTCTGCTTTCTGCTTCTGTTGTTAGTTTGTCGTCATACTTTTGTCAAGAAGTCTGTCCCTGTGCCAGCTGTTCCTGTGGTCCTGGTATCTTCCCTGTGATTGGACGGTCATCAGCTTACATATCCTCCAACCaccttcctccttctgtctgTTGGAGGATATTAGAGTTTTGCTCTTCATCTTCAGACTTTTTGCATGTTCGATTTTTACACTTCTACATTTTTGGATTTTTGTACTCCTTCAACTCTGCGATCAACATGAAGATGTCTGTCTTTGCCCGTGTTCTGCTGATCTCTGCTGTCGTGATCTCTGTGGACGGGGAAACTCCAGCTGACAAGTTTAAGAGACAGCATATCAACAAGGACATGGATCCTAAACGCTGTGATACAGGAGAGAAAAATCCATCAAAACAATAGGGCTTTTTGTAAGAAGGAGAACACCTTCATCAGTGCGAGTTATGGCGTAGTTAAAAAGGTCTGTGAGAAGGAAGGAGAGCCATATCCAAATGATAGAAATCTGAGAATCAGCCTTAACTCGTTTAGAGTTGTTAATTGCAAATGCAAGGACAACATGAGGCCTCCCAACTGTGGCTGCAAAGGCTCTCGTCCCAACCTGAGAATTGTAATCGGTTGTGACAACAATGATAATCCAGTTCACTATCAAGAAGGTCTGTACATTACCTCCCTGAATGAGACTAAACTGTTTCTACCTGATGAATCGGAGTAATTTGTTACTACCTGTTGAATCTGTAACTTAATACACATGTGACAGTTTAACTCTGGGTCTGTTTTTAATGCTGTCATGTTAACTGATTTATAAAGAGAAGATGAAAATAAAGTGACAACTGAGA

Function

GO:

id name namespace
GO:0004518 nuclease activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639826.1 True 865 lncRNA 0.41 3 42574061 42575485

Neighbor

gene id symbol gene type direction distance location
LOC120562755 NA coding upstream 44579 42527496 ~ 42529482 (+)
LOC120561585 NA coding upstream 723359 41727566 ~ 41850702 (+)
LOC120562406 NA coding upstream 997558 41551091 ~ 41576503 (+)
LOC120562396 NA coding upstream 1028467 41541090 ~ 41545594 (+)
LOC120562404 NA coding upstream 1072402 41500185 ~ 41501659 (+)
LOC120562768 NA coding downstream 88033 42663518 ~ 42666003 (+)
LOC120562762 LOC104963449 coding downstream 188918 42764403 ~ 42768664 (+)
LOC120562761 LOC104963449 coding downstream 212224 42787709 ~ 42800596 (+)
LOC120562763 LOC106675675,LOC106675676 coding downstream 250113 42825598 ~ 42831659 (+)
LOC120562760 LOC103358480 coding downstream 331531 42907016 ~ 42912785 (+)
G80695 NA non-coding upstream 12439 42561316 ~ 42561622 (+)
G80473 NA non-coding upstream 94997 42362740 ~ 42479064 (+)
G80465 NA non-coding upstream 97807 42338528 ~ 42476254 (+)
G80476 NA non-coding upstream 125088 42374477 ~ 42448973 (+)
G80444 NA non-coding upstream 488697 42083622 ~ 42085364 (+)
G80711 NA non-coding downstream 42175 42617660 ~ 42622605 (+)
G80713 NA non-coding downstream 100452 42675937 ~ 42770719 (+)
G80714 NA non-coding downstream 101891 42677376 ~ 42677864 (+)
G80717 NA non-coding downstream 121140 42696625 ~ 42743653 (+)
LOC120562769 NA non-coding downstream 143931 42719416 ~ 42720854 (+)
LOC120562757 LOC104947480 other upstream 34460 42532924 ~ 42539601 (+)
G80682 NA other upstream 88052 42485335 ~ 42486009 (+)
G80410 NA other upstream 567467 41939498 ~ 42006594 (+)
LOC120561589 NA other upstream 881056 41682413 ~ 41693005 (+)
G80337 NA other upstream 1117703 41421356 ~ 41456358 (+)
LOC120562767 NA other downstream 56922 42632407 ~ 42643990 (+)
LOC120562772 NA other downstream 208010 42783495 ~ 42786405 (+)

Expression


Co-expression Network