LOC120562773


Basic Information

Item Value
gene id LOC120562773
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 42856437 ~ 42863102 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639832.1
TTTGCATCGTGTCAGAGttctgctcttcttcttcttcttcaccttcAGACTTTTAGCAGTTTAGAttttacatttctacatttttggACTTTCGTACCTGAAACTTTCTCCAACAACACTTTGGTAtctctcctgctgctgactctagaactcatctctctcctgtcattcagATTCTGTTTCAGCTTCAAAGACGAAAACACAGAAGATCAACATGAAGATCTCTATATTTGCTGGTGTTCTGCTGCTCAGTGCTGCCGTGCTCTCTGTGGATGGACAAGAAACTCCAGCTCAAAAGTTTAACAGACAACATATCAAGAAGAAAATGAATCGTAACCGCTGTGACGCCGTGCTGAATAGGAAACACATCAGAAAAACCGACAATTGGTGTAAGGGGAGAAACACCTTCATCAGTGCGACTTATGGCGTTGTCCAAAGGGTCTGTTGGGATATTAAAAGAGGAGAGTCGTATCCaagaaatcaaaatcaaaatcaaaaccaaaaccaaaaccaaaataaaaatcaaaatcaaaatcaaaatctgAGAATCAGCCTTCGTGGGTTCAAAATTGTTAATTGCGATTGCAATATCAACCAGAAGAACCACTGTGACTGCCGTGGCTCTAGTGACATCAGGAGAATTGTAATCGGTTGTGAAAATGGTGTTCCTGTTCACTATGAAAAAGGTGAGGTAATTCCCAATGGATTAATGAAttagagtaatctgttactacctgatgaaccagagtaacctattactacctgatgtatcagagtaatctgtCAGTACCTGATGtatcagagtaatctattactacctgatgaaccagtAATCTGTTACAACCTGATGtatcagagtaatctattactacctgatgaaccagtAATCTGTTACAACCTGATGTATAatagtaatctgttactacttGATCAATAAAAGACATGTTGACAGTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639832.1 True 956 lncRNA 0.38 4 42856437 42863102

Neighbor

gene id symbol gene type direction distance location
LOC120562763 LOC106675675,LOC106675676 coding upstream 24778 42825598 ~ 42831659 (+)
LOC120562761 LOC104963449 coding upstream 55841 42787709 ~ 42800596 (+)
LOC120562762 LOC104963449 coding upstream 87773 42764403 ~ 42768664 (+)
LOC120562768 NA coding upstream 190434 42663518 ~ 42666003 (+)
LOC120562755 NA coding upstream 326955 42527496 ~ 42529482 (+)
LOC120562760 LOC103358480 coding downstream 43914 42907016 ~ 42912785 (+)
LOC120562781 NA non-coding upstream 10503 42842575 ~ 42845934 (+)
LOC120562780 NA non-coding upstream 75914 42778955 ~ 42780523 (+)
G80713 NA non-coding upstream 85718 42675937 ~ 42770719 (+)
G80719 NA non-coding upstream 97811 42740826 ~ 42758626 (+)
G80717 NA non-coding upstream 112784 42696625 ~ 42743653 (+)
G80737 NA non-coding downstream 12684 42875786 ~ 42876732 (+)
LOC120562779 NA non-coding downstream 23993 42887095 ~ 42888441 (+)
G80741 LOC105920527,LOC107095263,LOC103369598,LOC106535878 non-coding downstream 84756 42947858 ~ 42951947 (+)
G80749 NA non-coding downstream 130380 42993482 ~ 43067664 (+)
LOC120562776 NA non-coding downstream 133046 42996148 ~ 42997128 (+)
LOC120562772 NA other upstream 70032 42783495 ~ 42786405 (+)
LOC120562767 NA other upstream 212447 42632407 ~ 42643990 (+)
LOC120562757 LOC104947480 other upstream 316836 42532924 ~ 42539601 (+)
G80682 NA other upstream 370428 42485335 ~ 42486009 (+)
G80410 NA other upstream 849843 41939498 ~ 42006594 (+)

Expression


Co-expression Network