LOC120562851


Basic Information

Item Value
gene id LOC120562851
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 21724948 ~ 21725705 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639855.1
CAGGGAAACAACACGGTGGAGAATCCTGAGTACATTGTGTGAAATAAAAGGacatCAGTGTGACAAGTGTGTGACGTTGTGCGCTCCCTGGTGAAGCCCGTTTTTCAGAGTCTGTATTCTGTGAAATgCCTTTCTGCCAAATTGAAAATACTGCCAATGTTACAGAAATACCCCGGAGAAGTTATTGTGTCCTGTGTGGGTCTTAGCTCAGCTAACCATCaaaaaagctctttatcgagatgaattgtagatgagaatttgttgtttgtgtgtggtatgtgtgtacgtgtatatacatttgtgtatgtgtatatgtgtgtatatgtatatatttgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639855.1 True 336 lncRNA 0.40 3 21724948 21725705

Neighbor

gene id symbol gene type direction distance location
znf687a NA coding upstream 46090 21668490 ~ 21678858 (+)
LOC120563136 LOC103361607,LOC104959159 coding upstream 57117 21661202 ~ 21667831 (+)
LOC120561789 LOC103361609,LOC102785646,LOC102208248,LOC101464829,LOC100701476,LOC103478143,LOC106937891,LOC106916277 coding upstream 66418 21639092 ~ 21658530 (+)
LOC120561791 NA coding upstream 86208 21628731 ~ 21638740 (+)
rorc rorc,LOC102786611 coding upstream 97640 21608459 ~ 21627308 (+)
c7h1orf43 LOC104934460,LOC104959162,LOC103388199 coding downstream 38770 21764475 ~ 21767853 (+)
she LOC101483326,LOC102307252,LOC102202678 coding downstream 79369 21805074 ~ 21818222 (+)
chrnb2 chrnb2,LOC102780733,LOC104959165 coding downstream 92348 21818053 ~ 21835351 (+)
flad1 flad1,LOC102778463 coding downstream 164824 21890529 ~ 21900652 (+)
efna3b efna3,LOC105928532,LOC103478166,LOC103140801,LOC102234981 coding downstream 249487 21975192 ~ 22033267 (+)
G74288 NA non-coding upstream 432568 21291042 ~ 21292380 (+)
G74287 NA non-coding upstream 434634 21289553 ~ 21290314 (+)
G74286 NA non-coding upstream 435573 21289171 ~ 21289375 (+)
G74274 kiaa1429,LOC104941925 non-coding upstream 481381 21243229 ~ 21243567 (+)
G74234 NA non-coding upstream 568036 21101170 ~ 21156912 (+)
G74673 NA non-coding downstream 310573 22036278 ~ 22036659 (+)
G74729 NA non-coding downstream 389911 22115616 ~ 22116026 (+)
G74732 NA non-coding downstream 394033 22119738 ~ 22121346 (+)
G74737 NA non-coding downstream 403947 22129652 ~ 22129914 (+)
G74760 NA non-coding downstream 458078 22183783 ~ 22184037 (+)
them4 LOC106592246,LOC104959154,LOC101466288,LOC107096308,LOC100702377,LOC105029233,LOC106575342 other upstream 121490 21599034 ~ 21603458 (+)
crot acbd7,crot,LOC102783617,LOC101470173 other upstream 309054 21403035 ~ 21415894 (+)
LOC120563169 NA other upstream 388283 21331412 ~ 21336665 (+)
sec61b sec61b,LOC102796100 other upstream 713534 21008013 ~ 21011414 (+)
glipr2l glipr2 other upstream 1119783 20600323 ~ 20605165 (+)
G74633 tuft1,LOC102781808 other downstream 43843 21769548 ~ 21770286 (+)
slc50a1 slc50a1 other downstream 357964 22083669 ~ 22091963 (+)
LOC120561539 NA other downstream 406873 22132578 ~ 22136234 (+)
LOC120561537 NA other downstream 411842 22137547 ~ 22139223 (+)
snx27b snx27,LOC102196713,LOC102288812 other downstream 414075 22139780 ~ 22154684 (+)

Expression


Co-expression Network