LOC120562911


Basic Information

Item Value
gene id LOC120562911
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 37556675 ~ 37560786 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639871.1
CAGTttctagaagaggaagaggaggccaggGATGGCTGCACTGTGGGAGGAACAGAAGCAGAAGagtcagaggatgaaggagaagatggagtCTCTGAGTAGACagatagcagctctttcagacacagtcagagccacagaggagcagctgagagctgaagacgtctcattcctgatcaactacaaggctggcagtggaaagagtccagcagCACCCCCCGGCTGGGTGATCCACAGCTGCTCCcaggagctctgatagacgaggccaaacacctgggcaacctgagcttcaacatctggaacaagatgaaggacTTAGTTTCCTACACACCTCTAATTCTGGACCTAAACACTGCTTATCCAAAAAACATCCTGTCTTGAAGATCTGACCAGTGTGAGACGAGGAGAACAGCAGCTCCCCGATAATCCAGAGAGATTGGATTACTACTGTGGTgtcctgggctctgagggctttaactcagggactcacagctgggatgCCGATGTTGGAAACAATACACTCTGGGAACtgggtgtgttagcagagtctATCCAGAGGAAGGGAAAAATACGGTCTGGAATATGGAGCATAGTGTTCATTAAAGGTAAATACTTAGCACGGTCACAACCAGATCCAGACACTGTTCTCGTGTGGGAAGAATCCCCAGAGGGTCCagtgactctggactggaaCAGAGGAAAGCTGTCGTTCTATGATCTTGGTActaacacactcatacacaccttcacacacactttcactgagagGCTGTTTCCATTGTTTGACACTAGGGGAAGTGAAGGTTTTACCACTGAAGGTCTGTGTGACTGTAGAACAGAAATAGATGATGGTGATGAACATGAATCAAGAATCAGTTTAATTCTgggataaaaaacaacaactttttatATTAAGagtcaaatattttattaacagCAAATATTATAAACTGTCAAAAATCagtctgtttatttgtttgtctgtcatcAGAATAACAGAATAAATATTGCCCCGATTTTCATCATGTAACTTGGTGGAAGAGTGTAGCATGGGCTGATATaaaaacccattacattttgatcTGAATCCGGggcagatacacaaattatttattcattaacaTTGCGAGCTACAGCGTTTGTGTTGCATTCAAGTGGTGTAGGAATTATTGGAAAAAATAGTTCCTGACTGGGAAAAAtgacactgcattaacattATGAGATAAAGCATTCCTTGGGGAAGGTCTGTGCTCTCCGAGTGCTCTTCTAGCTAAACTTATTAACcatcctgttgtcctcgggtcaaatttgacccattttcaaaaagtttctatatcagaaatgtggtttactttcaaccaaattttaaaacaaaataacgtggatggttccatcaCCGCTCTTctcaagttaaataaatgttcaGTTCACAACTTTTATTGACTTTGggcgttttattcaattttattagcctgacaagccagactgttgtgttttctgtggaGTTGTTATGTTagaaaagttatttattgtTATGCCTAATTAATTACATCGATCAATCAAATTGTTTACCTTAAACCAGAGCTAGTGACATTTATAGAAGAACGTTTGCGGTGTAGCAGCCAAATAGAGTAGTGCCTCTTTAAGAGGAGTGTGCTGTGAGTACTAGGCTACAGGTGACCGGTGATTACTCCGTGAAAAGGAAGCACGAGATTCATGCAGTCTGTGATGACTGTCAACCCGGTGTGCAGCCACTTGgtttATTACCTGGTTTCCCTTTGTGAATacaagaaattaaacaaacaaatgtggaATACCGAGGTAgagccagttgaggtggttcgggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639871.1 True 1847 lncRNA 0.42 3 37556675 37560786

Neighbor

gene id symbol gene type direction distance location
tmem116 NA coding upstream 131855 37404963 ~ 37424820 (+)
LOC120561882 NA coding upstream 164683 37387117 ~ 37391992 (+)
LOC120562463 NA coding upstream 178891 37362224 ~ 37377784 (+)
LOC120561883 NA coding upstream 197050 37354983 ~ 37359625 (+)
LOC120561884 NA coding upstream 205104 37336071 ~ 37351571 (+)
LOC120561682 NA coding downstream 4970 37565756 ~ 37568029 (+)
LOC120562860 NA coding downstream 16693 37577479 ~ 37578431 (+)
LOC120562465 NA coding downstream 17811 37578597 ~ 37579855 (+)
LOC120561715 NA coding downstream 22337 37583123 ~ 37586138 (+)
LOC120562469 NA coding downstream 145319 37706105 ~ 37709961 (+)
G79011 NA non-coding upstream 13130 37542905 ~ 37543545 (+)
G79004 NA non-coding upstream 26078 37525876 ~ 37530597 (+)
G78999 NA non-coding upstream 56565 37499890 ~ 37500110 (+)
G78998 NA non-coding upstream 62072 37492806 ~ 37494603 (+)
G78990 NA non-coding upstream 88795 37433346 ~ 37467880 (+)
G79262 NA non-coding downstream 46399 37607185 ~ 37645567 (+)
G79284 NA non-coding downstream 172422 37733208 ~ 37797202 (+)
G79297 NA non-coding downstream 198449 37759235 ~ 37760174 (+)
G79305 NA non-coding downstream 211454 37772240 ~ 37775336 (+)
G79309 NA non-coding downstream 234874 37795660 ~ 37872187 (+)
G79007 LOC103364590,LOC102314205,LOC102798195 other upstream 6073 37530690 ~ 37550602 (+)
G78989 NA other upstream 123996 37431171 ~ 37432679 (+)
G78888 NA other upstream 616721 36839222 ~ 36939954 (+)
LOC120562457 NA other upstream 852682 36685936 ~ 36703993 (+)
LOC120562456 dennd4b other upstream 886646 36580965 ~ 36670029 (+)
cmtm7 cmtm7 other downstream 318130 37878916 ~ 37888006 (+)
nek11 nek11,LOC102796711 other downstream 495630 38056416 ~ 38145804 (+)
G79351 NA other downstream 609268 38170054 ~ 38324620 (+)
LOC120562476 NA other downstream 621364 38182150 ~ 38188763 (+)
LOC120562481 NA other downstream 740639 38301425 ~ 38305892 (+)

Expression


Co-expression Network