LOC120563028


Basic Information

Item Value
gene id LOC120563028
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 39385546 ~ 39388207 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639894.1
GGAGAACACTTTTGGAAACACTGAAGCGGTTGAATATGGAGGACTTTGTTAAACTAAAGTTAACAGAACGGCAACTTCTTGAGCTGATTGACACTTTTGCAGATTGTGCAGGACTTCGAGGTTCTTCATAAAGAGGCATCAGACTAAATCTTTGACCTGGAGGAGGTTCAGCGAGAAGCTTGTTCATGCGGCCCAGTGGGGGGGGGAGCTCCAGGTGCAGACACAGTCTTTGTCTCAAGgCTCCAAAGACTACATTGCCCTGATGGTTCTGCCAAGCCTGATTCCACCTGCAGTCTTCAGGATGGGCCGAAAGACCGTGAGGACTACAGTGTCTGACGCCATGAAGGCCTTCATCGATCTTAAGCCTgTCGGAGCCAACATGGTGGAGTACCTTCAGGCAGCAGAGCAGACCATACCCCTGCACCCTGGTGTTGGGAGGCGAGGACTGCTGCTCTCAGGCATTCACCGTTCCCAGTGGGCCGGCCCTGGAGCACGACAGCGTTGTCCAAGCTGTACATgtttgtgtcaaatgtttttatgtttgataTCAATTTCCCAAAGCAGTGTTTCTCTGCTTAGCAGTTCCTCCAGAAAGAATGGGGGGGTGGTAGTTTGTTTTTTGGAAATGCTCATGCGATAAGggaattctctctctctgtctctctttctctctctgataTTTAGGAGGAATATAAGGAGGAAATgaattattgttaattgttgCTTGGTATTAGTCCAGTTATTTGATACTCATTTTGAAATGAGGTAGGGATAATGTGGCCCCATGCATTTCTTCTTTGGAAACGCTCATGTGATAAGGGAATTGGGCTTGTTATTGTTATTCCAGTTTTTCTCTTTAAATgagtaaattaaatattgttCAATAAAATCAGTGACATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639894.1 True 902 lncRNA 0.45 5 39385546 39388207

Neighbor

gene id symbol gene type direction distance location
LOC120562489 NA coding upstream 107043 39265833 ~ 39278503 (+)
LOC120563022 NA coding upstream 354712 39020810 ~ 39030834 (+)
LOC120563021 NA coding upstream 375970 38995153 ~ 39009576 (+)
plin6 NA coding upstream 482286 38884290 ~ 38903260 (+)
LOC120563014 NA coding upstream 793051 38581518 ~ 38592495 (+)
LOC120563011 syt11,LOC102778393 coding downstream 3741 39391948 ~ 39419673 (+)
LOC120563008 NA coding downstream 37121 39425328 ~ 39427120 (+)
LOC120562494 LOC108250191,LOC103388058,LOC101480860,LOC107095276 coding downstream 393029 39781236 ~ 39803887 (+)
LOC120562359 NA coding downstream 423648 39811855 ~ 39828704 (+)
LOC120562496 LOC103369586 coding downstream 536118 39924325 ~ 39979365 (+)
G79710 NA non-coding upstream 3879 39380288 ~ 39381667 (+)
LOC120563033 NA non-coding upstream 24860 39359474 ~ 39360686 (+)
LOC120563032 NA non-coding upstream 49595 39335351 ~ 39335951 (+)
G79689 NA non-coding upstream 77807 39230944 ~ 39307739 (+)
G79714 NA non-coding downstream 10448 39398655 ~ 39399287 (+)
G79717 NA non-coding downstream 44106 39432313 ~ 39433121 (+)
LOC120563031 LOC107095265,LOC103369586 non-coding downstream 87568 39475775 ~ 39479389 (+)
LOC120563029 NA non-coding downstream 96744 39484951 ~ 39485980 (+)
LOC120563030 NA non-coding downstream 111139 39499346 ~ 39501137 (+)
LOC120563015 NA other upstream 39114 39312639 ~ 39346432 (+)
LOC120563019 NA other upstream 54030 39321432 ~ 39331516 (+)
dcst2 NA other upstream 79459 39302039 ~ 39306087 (+)
cpne4a cpne4,LOC107379031,LOC103372348,LOC102220834,LOC108412597 other upstream 605186 38676736 ~ 38780360 (+)
G79615 NA other upstream 674537 38691646 ~ 38711009 (+)
G79713 NA other downstream 45254 39433461 ~ 39454292 (+)
G79722 LOC100712425 other downstream 72241 39460448 ~ 39463841 (+)
LOC120562364 LOC108234077 other downstream 376966 39765173 ~ 39771420 (+)
LOC120562498 LOC103369894 other downstream 902775 40290982 ~ 40345060 (+)
G80003 NA other downstream 928532 40316739 ~ 40321067 (+)

Expression


Co-expression Network