LOC120563030


Basic Information

Item Value
gene id LOC120563030
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 39499346 ~ 39501137 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639896.1
GTTACGACTAGGCTTGATATAGAGGGTCACCAGACTACACCAGTTGAAGAGGAGGATATGGCTTCCTTAGATGACAGCAGATCCAGTGGGACCAGCAATCAGAGTATTGTGAGTGGGAGTAATGTCTCTGAAAATCACAGAAGCGAGTCTGAGGGTGATATTGGGGATGGCACAAGCGAACAAGAGGCATTGCATGAACCCGGGGACAGTAGGAGTGACTATTCCATGTCAGTGACGACTCCAAGTGGAATCAGTAGTGTAACTGGCTCGGCCGGCTGTTCTACATGCATTACTCCAGAACGTCACTACATGCCACCAAGAGGGAACTTATCTATGACTCAAGGAAGGAGTCAAGGAGCAGAACTGTCAGAGACTTTCTTCAGACCTGAGGGTTCAACGACAACCAGAGCAGGAAGAGTAGTAAAACCTGTTAGAAGACTACTTGAGTCAATGAGTATGGTTATGGGAGAGCCCGCAAGTAAGGAACCTCTGGCTGCCTTGTTTAAAGCCCTTTTGACTCTTATAGAGGTGTAATCCATTAATAGGGTCTTTCAGTTAAACTTTTAGGACCCAGACAATTTAGAATGTAGGTATTTTATCAGAGGGTTCTTGGTTATATGTATAAGGGCATATTTCTACCTGGCAAAGTGTTTTGCTGTCCTATTGGACGACTCTGGTCAAGGTAACCCCCTATAAAGAAAAGAGTTCTCACCTGGTCTAAAAGTTTGCTGTAATTAAGGAGGGGTGAATGTaatagtgtgttttgtgtatattccagctaactttatttttttaagtggtaCTGTCTCAAAAGGGGAAACAGGATGTTCCATTTGTCGACAATGACAGGGGGAGGGTATAGATTTTACTATCTTCttataatgttatttaaaatacagtGATTGTGCTAGATAAGCCTTGTCACTGTTGTTGAATTGTTTCCAACTCAAAAGAAAGTAGTAATGTttcatgtacatttattttcatttagataTGTTGATAATTGTGATCGGCGAATCACCTGTGTATTGTGGTACATGCTCATGAGCGTCCCTCTCTCAGTCTGTTTTggaaactgagagagacagTAGTCTGAGAAGAGGGTGTGTGGAACTGATGCAGTCCCTGTCACATGTTGTGTCATTACAGGTATGGTTGCCAAAGAAAATAACCACTATACGATCATTTCAATTAATGTTTTACTatattgtgtaaatgttttgttatCTTTAGactgtgtaaatgttttgttatgCTCAGTCTGTTTTggaaactgagagagacagtagTCTGAGAAGAGGGTGTGTGGAACTGATGCAGTCCCTGTCACATGTTGTGTCATTACAGACTCACTCAGTAAAGCAAAGATCCAAAGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639896.1 True 1378 lncRNA 0.41 2 39499346 39501137

Neighbor

gene id symbol gene type direction distance location
LOC120563008 NA coding upstream 72226 39425328 ~ 39427120 (+)
LOC120563011 syt11,LOC102778393 coding upstream 79673 39391948 ~ 39419673 (+)
LOC120562489 NA coding upstream 220843 39265833 ~ 39278503 (+)
LOC120563022 NA coding upstream 468512 39020810 ~ 39030834 (+)
LOC120563021 NA coding upstream 489770 38995153 ~ 39009576 (+)
LOC120562494 LOC108250191,LOC103388058,LOC101480860,LOC107095276 coding downstream 280099 39781236 ~ 39803887 (+)
LOC120562359 NA coding downstream 310718 39811855 ~ 39828704 (+)
LOC120562496 LOC103369586 coding downstream 423188 39924325 ~ 39979365 (+)
LOC120562361 LOC103369586 coding downstream 581893 40083030 ~ 40093260 (+)
si:dkey-15h8.17 NA coding downstream 610296 40111433 ~ 40113823 (+)
LOC120563029 NA non-coding upstream 13366 39484951 ~ 39485980 (+)
LOC120563031 LOC107095265,LOC103369586 non-coding upstream 19957 39475775 ~ 39479389 (+)
G79717 NA non-coding upstream 66225 39432313 ~ 39433121 (+)
G79573 NA non-coding upstream 74448 39382036 ~ 39424898 (+)
G79903 NA non-coding downstream 57971 39559108 ~ 39575672 (+)
LOC120562366 NA non-coding downstream 73201 39574338 ~ 39588482 (+)
G79911 NA non-coding downstream 155263 39656400 ~ 39656802 (+)
G79913 NA non-coding downstream 173586 39674723 ~ 39675317 (+)
G79918 NA non-coding downstream 212076 39713213 ~ 39778094 (+)
G79722 LOC100712425 other upstream 35505 39460448 ~ 39463841 (+)
G79713 NA other upstream 45054 39433461 ~ 39454292 (+)
LOC120563015 NA other upstream 152914 39312639 ~ 39346432 (+)
LOC120563019 NA other upstream 167830 39321432 ~ 39331516 (+)
dcst2 NA other upstream 193259 39302039 ~ 39306087 (+)
LOC120562364 LOC108234077 other downstream 264036 39765173 ~ 39771420 (+)
LOC120562498 LOC103369894 other downstream 789845 40290982 ~ 40345060 (+)
G80003 NA other downstream 815602 40316739 ~ 40321067 (+)
LOC120562499 LOC103374404 other downstream 877545 40378682 ~ 40441316 (+)
LOC120562387 NA other downstream 1144522 40645659 ~ 40656567 (+)

Expression


Co-expression Network