LOC120563035


Basic Information

Item Value
gene id LOC120563035
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 39120310 ~ 39121952 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639901.1
ATCCTTTAAAAATTGCTTCGTTGATGAGTTGTGCTCCTGTCTGGATAAGACATATTCAAAAAAAGGTCCTGGCTGGGATAGCTTTTGTCAGCTCCCTACGTATTGATGTGTTATAGCTGGACTGCGGAGCTTTCATGTGATGGAGGCAGAATttcttactactactactccccTTCTCTCAAAGTTCCTTACACAACTTGACCAACGCACTGAGCAGCTCATGAAAGTGTTGAACAAAGGAGGCTCTGCAGGGAGGAAAATCAGGATCATTATGGCCCCAATGACAAAGGAAGCCGAGGGAGCTTGAGAAGTCACCTTTGGTATCTACAGCATCGATGTTAAGGGAGGTGATACCGCCACTCCTCCAGCCGATGTTGGAATTGTGATTCAGCGTGTTGAAGTTCTGCACGACTTGAGAGACTTTGCCTCTGCATGTGCCCTGAGTTATCCTAACAGACTGAAAGCCTTCTTTGAAGTACTTCAAAAGTTCTTCCTTCAAATGGATGCTTGCAGACTCTCAACCAAGGTACAGCTGCTCATTAACTAACTGTACAAATGAGACAATCACTGATTTGGATGCTGAATGTTTCATTGAACAGGAGAAATATTTAGGGccgaaactgaaaaaaattatCTGTTTGAAAATAGAGCAGAGAAACTACACTTGAGGAAAACGACCAATTTCTTTGCAAACTTTTGAAAAACTTATCATACAGGAAAAGTGGTAGTTGAGTGGCACTACTAGAGAAGTGATGTAGAATTGAGAGACCATGCTGCGCAAAAACGGTTGATATACAACTATGGCTATTTTGTGGATGTTTTAACACTAAGCTGCATCAAAAACAACTGCAAGGAAGTTCAATCATCAGACCATCTTAACCATCGTTAAAGAAATCCTACTTTAGAGTAGATGTTTGTTAAAGTGTTGCCACTGAAAACTTTATTTTAga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639901.1 True 950 lncRNA 0.41 4 39120310 39121952

Neighbor

gene id symbol gene type direction distance location
LOC120563022 NA coding upstream 89476 39020810 ~ 39030834 (+)
LOC120563021 NA coding upstream 110734 38995153 ~ 39009576 (+)
plin6 NA coding upstream 217050 38884290 ~ 38903260 (+)
LOC120563014 NA coding upstream 527815 38581518 ~ 38592495 (+)
tg NA coding upstream 544742 38525204 ~ 38575568 (+)
LOC120562489 NA coding downstream 143881 39265833 ~ 39278503 (+)
LOC120563011 syt11,LOC102778393 coding downstream 269996 39391948 ~ 39419673 (+)
LOC120563008 NA coding downstream 303376 39425328 ~ 39427120 (+)
LOC120562494 LOC108250191,LOC103388058,LOC101480860,LOC107095276 coding downstream 659284 39781236 ~ 39803887 (+)
LOC120562359 NA coding downstream 689903 39811855 ~ 39828704 (+)
G79660 NA non-coding upstream 98129 39020939 ~ 39022181 (+)
G79657 NA non-coding upstream 111420 39008640 ~ 39008890 (+)
G79653 NA non-coding upstream 113306 38975402 ~ 39007004 (+)
G79639 NA non-coding upstream 233112 38886728 ~ 38887198 (+)
G79635 NA non-coding upstream 242308 38874927 ~ 38878002 (+)
G79679 NA non-coding downstream 14534 39136486 ~ 39136756 (+)
G79685 NA non-coding downstream 69482 39191434 ~ 39193622 (+)
G79686 NA non-coding downstream 72028 39193980 ~ 39194992 (+)
G79592 NA non-coding downstream 107919 39229871 ~ 39232219 (+)
G79689 NA non-coding downstream 108992 39230944 ~ 39307739 (+)
LOC120562999 NA other upstream 21397 38594045 ~ 39098913 (+)
cpne4a cpne4,LOC107379031,LOC103372348,LOC102220834,LOC108412597 other upstream 339950 38676736 ~ 38780360 (+)
G79615 NA other upstream 409301 38691646 ~ 38711009 (+)
G79605 NA other upstream 447298 38666272 ~ 38673012 (+)
cmtm6 NA other upstream 664751 38433974 ~ 38455559 (+)
dcst2 NA other downstream 180087 39302039 ~ 39306087 (+)
LOC120563015 NA other downstream 190687 39312639 ~ 39346432 (+)
LOC120563019 NA other downstream 199480 39321432 ~ 39331516 (+)
G79713 NA other downstream 311509 39433461 ~ 39454292 (+)
G79722 LOC100712425 other downstream 338496 39460448 ~ 39463841 (+)

Expression


Co-expression Network