LOC120563037


Basic Information

Item Value
gene id LOC120563037
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 38611259 ~ 38611869 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639903.1
ACTGACCCTCAACCTGCTACTTATCATGTGACTGTTCTGATGGGTTTGTCTCTTCCTGCCTTTTTTTCAGGTCAGTAGACATCACTGCCACCACCACCTGCATATGAGTCAACACCACACAAGAAACCAGCCGGTCGCCCAGAGCTGGATGGGTGAATTCTAACGCAAGCTCGGCCTGCCACTTCATCTTGGGACCCAGTTGAAGcaacttttcCTGACAAGCCCGGAGGTTGGACTGGAGGTACTGCCATCCGTCGCATGCTACGGCGAGTCGCAACCAATGATGTTCTAAAACTGTATATCCTGCGGGGCAGAAAGGCAAAGaaggccttccaggacctgacattctgcagggttataacaggcaggtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639903.1 True 372 lncRNA 0.52 3 38611259 38611869

Neighbor

gene id symbol gene type direction distance location
LOC120563014 NA coding upstream 18764 38581518 ~ 38592495 (+)
tg NA coding upstream 35691 38525204 ~ 38575568 (+)
si:dkey-7j14.6 NA coding upstream 182774 38403152 ~ 38428485 (+)
LOC120563007 NA coding upstream 319936 38287737 ~ 38291323 (+)
LOC120562479 LOC104959728,LOC104960595,LOC106675582 coding upstream 341191 38268277 ~ 38270068 (+)
plin6 NA coding downstream 272421 38884290 ~ 38903260 (+)
LOC120563021 NA coding downstream 383284 38995153 ~ 39009576 (+)
LOC120563022 NA coding downstream 408941 39020810 ~ 39030834 (+)
LOC120562489 NA coding downstream 653964 39265833 ~ 39278503 (+)
LOC120563011 syt11,LOC102778393 coding downstream 780079 39391948 ~ 39419673 (+)
G79568 NA non-coding upstream 54974 38556066 ~ 38556285 (+)
G79373 NA non-coding upstream 89442 38456643 ~ 38521817 (+)
G79374 NA non-coding upstream 151264 38405111 ~ 38459995 (+)
G79392 NA non-coding upstream 157433 38453146 ~ 38453826 (+)
G79370 NA non-coding upstream 198852 38405477 ~ 38412407 (+)
LOC120563036 NA non-coding downstream 30679 38642548 ~ 38647914 (+)
G79617 NA non-coding downstream 104519 38716388 ~ 38800638 (+)
G79623 NA non-coding downstream 184749 38796618 ~ 38797157 (+)
G79625 NA non-coding downstream 192704 38804573 ~ 38806484 (+)
G79628 NA non-coding downstream 240725 38852594 ~ 38853108 (+)
cmtm6 NA other upstream 155700 38433974 ~ 38455559 (+)
G79351 NA other upstream 286639 38170054 ~ 38324620 (+)
LOC120562481 NA other upstream 305367 38301425 ~ 38305892 (+)
LOC120562476 NA other upstream 422496 38182150 ~ 38188763 (+)
nek11 nek11,LOC102796711 other upstream 465455 38056416 ~ 38145804 (+)
G79605 NA other downstream 54403 38666272 ~ 38673012 (+)
cpne4a cpne4,LOC107379031,LOC103372348,LOC102220834,LOC108412597 other downstream 64867 38676736 ~ 38780360 (+)
G79615 NA other downstream 79777 38691646 ~ 38711009 (+)
dcst2 NA other downstream 690170 39302039 ~ 39306087 (+)
LOC120563015 NA other downstream 700770 39312639 ~ 39346432 (+)

Expression


Co-expression Network