LOC120563039


Basic Information

Item Value
gene id LOC120563039
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 38367119 ~ 38367849 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639905.1
ATCCAGACTTTCCGAAATGAGAATAGaactgaAAGATTACCAACACAAGGTGGTCGGGAACGtcttctgtctcctgaacaggAAACTGAAATAATCAACATGGTCCTAGAAAATAACGCCATAACATTACGgcaaatacaaagaaaaatcCTAGAAAACAATGAGATGTTTCAAAATATTGATAGGGTAAGCTTATCAACACTGGACCGTGTCTTGCGCAGAAATAATCTGAGGATGAAGCAGGTCTACAGGGTGCCATTTGAACGCAATTCAGAAAGAAATTGCGACATAACTATGTGCAAagagTCCTCGAGCTAGAGGTGGCTGCAGTGGAGCACCAGTTCATCTTCATTGATGAGGTTGGATTCAACCTCACAAAAAGACGAAGGAGGGGAAGGAATATCATCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639905.1 True 409 lncRNA 0.42 3 38367119 38367849

Neighbor

gene id symbol gene type direction distance location
LOC120563007 NA coding upstream 75796 38287737 ~ 38291323 (+)
LOC120562479 LOC104959728,LOC104960595,LOC106675582 coding upstream 97051 38268277 ~ 38270068 (+)
LOC120563002 NA coding upstream 108084 38257203 ~ 38259035 (+)
LOC120561705 NA coding upstream 521405 37826889 ~ 37845714 (+)
zgc:153896 LOC100708450,LOC103364589,LOC101166003,LOC106527367 coding upstream 624653 37734725 ~ 37742466 (+)
si:dkey-7j14.6 NA coding downstream 35303 38403152 ~ 38428485 (+)
tg NA coding downstream 157355 38525204 ~ 38575568 (+)
LOC120563014 NA coding downstream 213669 38581518 ~ 38592495 (+)
plin6 NA coding downstream 516441 38884290 ~ 38903260 (+)
LOC120563021 NA coding downstream 627304 38995153 ~ 39009576 (+)
G79367 NA non-coding upstream 101842 38264735 ~ 38265277 (+)
G79355 NA non-coding upstream 131128 38187616 ~ 38235991 (+)
G79359 NA non-coding upstream 141647 38224568 ~ 38225472 (+)
G79285 NA non-coding upstream 145370 38063697 ~ 38221749 (+)
G79384 NA non-coding downstream 5978 38373827 ~ 38379212 (+)
G79386 NA non-coding downstream 12743 38380592 ~ 38380881 (+)
G79374 NA non-coding downstream 37262 38405111 ~ 38459995 (+)
G79370 NA non-coding downstream 37628 38405477 ~ 38412407 (+)
G79392 NA non-coding downstream 85297 38453146 ~ 38453826 (+)
G79351 NA other upstream 42499 38170054 ~ 38324620 (+)
LOC120562481 NA other upstream 61227 38301425 ~ 38305892 (+)
LOC120562476 NA other upstream 178356 38182150 ~ 38188763 (+)
nek11 nek11,LOC102796711 other upstream 221315 38056416 ~ 38145804 (+)
cmtm7 cmtm7 other upstream 479113 37878916 ~ 37888006 (+)
cmtm6 NA other downstream 66125 38433974 ~ 38455559 (+)
LOC120562999 NA other downstream 226196 38594045 ~ 39098913 (+)
G79605 NA other downstream 298423 38666272 ~ 38673012 (+)
cpne4a cpne4,LOC107379031,LOC103372348,LOC102220834,LOC108412597 other downstream 308887 38676736 ~ 38780360 (+)
G79615 NA other downstream 323797 38691646 ~ 38711009 (+)

Expression


Co-expression Network