Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120563080 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053118.1 |
| NCBI id | CM020915.1 |
| chromosome length | 43092710 |
| location | 32951977 ~ 32952703 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005639907.1 | True | 232 | lncRNA | 0.39 | 3 | 32951977 | 32952703 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120562446 | NA | coding | upstream | 1267 | 32947311 ~ 32950710 (+) |
| scnm1 | LOC104949611 | coding | upstream | 40785 | 32905361 ~ 32911192 (+) |
| tnfaip8l2b | tnfaip8l2 | coding | upstream | 51648 | 32892531 ~ 32900329 (+) |
| LOC120562193 | LOC103388706 | coding | upstream | 63627 | 32853357 ~ 32888350 (+) |
| LOC120562270 | scap | coding | upstream | 577790 | 32315022 ~ 32374187 (+) |
| hormad1 | NA | coding | downstream | 79536 | 33032239 ~ 33049137 (+) |
| onecutl | LOC106524064,LOC104923936,LOC108243192 | coding | downstream | 134487 | 33087190 ~ 33096138 (+) |
| lingo4b | LOC104947071,LOC108243198 | coding | downstream | 223206 | 33175909 ~ 33200642 (+) |
| si:ch211-113g11.6 | LOC103362574,LOC103388694,LOC108243248 | coding | downstream | 254004 | 33206707 ~ 33260917 (+) |
| tlr18 | LOC103362575 | coding | downstream | 311027 | 33263730 ~ 33278517 (+) |
| G77867 | NA | non-coding | upstream | 130489 | 32821243 ~ 32821488 (+) |
| G77862 | NA | non-coding | upstream | 185469 | 32766271 ~ 32766508 (+) |
| G77776 | NA | non-coding | upstream | 498567 | 32453187 ~ 32453410 (+) |
| G77762 | NA | non-coding | upstream | 575064 | 32374697 ~ 32376913 (+) |
| G77764 | NA | non-coding | upstream | 582899 | 32360545 ~ 32369078 (+) |
| G77887 | LOC103369030 | non-coding | downstream | 64818 | 33017521 ~ 33050500 (+) |
| G77890 | NA | non-coding | downstream | 69395 | 33022098 ~ 33029791 (+) |
| G77897 | NA | non-coding | downstream | 98777 | 33051480 ~ 33052859 (+) |
| G77895 | NA | non-coding | downstream | 144925 | 33097628 ~ 33099548 (+) |
| G77899 | NA | non-coding | downstream | 149200 | 33101903 ~ 33105633 (+) |
| LOC120561717 | NA | other | upstream | 530505 | 32405133 ~ 32421472 (+) |
| G77682 | tbx20 | other | upstream | 972068 | 31976318 ~ 31979909 (+) |
| G77447 | NA | other | upstream | 1815831 | 31134829 ~ 31136146 (+) |
| rab5ab | rab5a,LOC104947906,LOC103388351,LOC105936747,LOC100704868,LOC101078239,LOC104931780 | other | upstream | 2220368 | 30687338 ~ 30731609 (+) |
| LOC120562443 | NA | other | upstream | 2591389 | 30351495 ~ 30360588 (+) |
| G77888 | NA | other | downstream | 147710 | 33100413 ~ 33101534 (+) |
| bmper | bmper | other | downstream | 873384 | 33826087 ~ 33879132 (+) |
| LOC120562157 | NA | other | downstream | 941657 | 33894360 ~ 33904285 (+) |
| sh3bp5b | sh3bp5,LOC102783023 | other | downstream | 1037839 | 33990542 ~ 34042648 (+) |
| G78200 | NA | other | downstream | 1576652 | 34529355 ~ 34544379 (+) |
