LOC120563188


Basic Information

Item Value
gene id LOC120563188
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 36161780 ~ 36172164 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639918.1
GCCTACTTTCAGCCTCAAGTGTGTTTTAACAGCGACAGGTTGAGGTGTTGATCCGAAGACTGACCGATTTTGTGAAGTCAAGAAGATGAGTGGATCTGCGTCTACAAGTGGCCGTTTAATGGCTGAAGGGTCTCAACTCTTCAATGGAAATCCTCCAAACTTTCACACTGAACCCAGACCTTCACAACCATGGGTCCAGTCTATTTCAAGCAGTCAGGAGAACCAGAACACCCTGAAGGGGATTCAATGTGAGAGGAACGACTCCAAGGTGATTTATATAGACTTCTGAACCAAGCCTTTATCAAACAAGATTCACTGAAGTCAAGAAGATGAATAAATCTCAGAGAGGATCAGCGTCTTCAAATGTCAGTTTAATTCAACAATGAACATGAAGTGAGACAAATTGAAACAGTGTTTAACAGACATGAGGAGGACATCTTCAAGGCCAAACACTAACATGTTGTTATGGATTCATTAAAAGTAACCTAAAAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639918.1 True 494 lncRNA 0.41 6 36161780 36172164

Neighbor

gene id symbol gene type direction distance location
LOC120563175 NA coding upstream 32538 36111050 ~ 36129242 (+)
dek LOC102312342,LOC102210945 coding upstream 51648 36092199 ~ 36110132 (+)
LOC120563160 LOC104935873 coding upstream 135209 36024626 ~ 36026571 (+)
LOC120562276 NA coding upstream 260888 35896350 ~ 35900892 (+)
LOC120562454 NA coding upstream 277845 35875127 ~ 35883935 (+)
LOC120563177 NA coding downstream 6043 36178207 ~ 36190415 (+)
nat16l NA coding downstream 188536 36360700 ~ 36367025 (+)
LOC120563182 NA coding downstream 196530 36368694 ~ 36383096 (+)
LOC120563185 NA coding downstream 356317 36528481 ~ 36541530 (+)
atp2c1 LOC103369286 coding downstream 588346 36760510 ~ 36792668 (+)
G78756 NA non-coding upstream 73684 36087873 ~ 36088096 (+)
G78736 NA non-coding upstream 127128 36034348 ~ 36034652 (+)
G78716 NA non-coding upstream 198275 35962773 ~ 35963505 (+)
G78707 NA non-coding upstream 232884 35928440 ~ 35928896 (+)
G78706 NA non-coding upstream 252711 35908820 ~ 35909069 (+)
G78776 NA non-coding downstream 116628 36288792 ~ 36289154 (+)
G78770 NA non-coding downstream 162953 36335117 ~ 36339554 (+)
G78798 NA non-coding downstream 225885 36398049 ~ 36415884 (+)
G78813 NA non-coding downstream 274483 36446647 ~ 36507814 (+)
G78822 NA non-coding downstream 328484 36500648 ~ 36706609 (+)
LOC120562279 NA other upstream 273608 35865842 ~ 35888172 (+)
LOC120562275 NA other upstream 387792 35743295 ~ 35773988 (+)
G78594 NA other upstream 753098 35405375 ~ 35408682 (+)
LOC120562567 NA other upstream 1305248 34839157 ~ 34856532 (+)
G78200 NA other upstream 1617401 34529355 ~ 34544379 (+)
G78772 NA other downstream 85996 36258160 ~ 36350995 (+)
LOC120563181 LOC107378893,LOC103370072 other downstream 220088 36392252 ~ 36465230 (+)
LOC120562456 dennd4b other downstream 408801 36580965 ~ 36670029 (+)
LOC120562457 NA other downstream 513772 36685936 ~ 36703993 (+)
G78888 NA other downstream 667058 36839222 ~ 36939954 (+)

Expression


Co-expression Network