LOC120563195


Basic Information

Item Value
gene id LOC120563195
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 38045995 ~ 38050535 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639919.1
CCCAGAGATGCCTTCACCTTTACAAGGAGAATACCTTAAGTCCTGACAGACTGAGCCTCCAGCCGTCCCTCAGAAGCCTGTATTcaagGTCGTCttgttgcacactgcacagcCAACATGGGCAATACATGGGGCGAATGTTCCATTGACATTAAAAATGAATCCTCTACCTACGACTTCGGCAACCCCTGTATACATATGGTAAGGGGTCAATGCTCTAACCCTCTGCCACCGCTGATTGAGTCAAATTCATCTGGCAGTGCACAGTTCGGCAAGACTTACGGCAGTCCTACAGGAACTGTTGGCGTCTTCACTTATGACATCATCAACAAATCTACAAAAACGACCACTGGGATAATTGCTGTCATGTTCTCTGTGCCCTACGACTATACCTATTTCGATAACTTGTATGCAGTGGGAAACTTTGGTAATAGCCAAAATTGTGATTATGATCTTTATCGTAAGATGTACTATGAATCACACAGCAGATTTGTCAGAGGTAAAGCAACTGATCCCAGTATCACTCATACGGGTGATTATGTCACCATCTTTGCATCAATGTCGAACGCAGGCCAGTCTGCCCTAAAAGTGGTAGTGAAAGACAAATGAAATAAGAGAATTGGAAAGTGCTAAAAAGTAGATTACCCTGCAGCACATTCTGCTTTTATAGCTAATACATAGTCAATGTGTAGTCATTTTGGATAATTTTGTTCAGGGCAAAAATAATTAGGAATGCGTGCTTAAGATGTTTTCATTGCTTTACAATATTATTCCACTGTTTTGTTTAATGTGTAGAAACTGTAGTAGAGCTGTTGATTGTCCTTCGAAAGAAAAAGATGATGCATTTGATGGATTAGTTACACGTGAGTAACAAGTAATTATGTCATGCCAAAAAGTTTAATAAAGCTTTCAAAAGTA

Function

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0071944 cell periphery cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639919.1 True 918 lncRNA 0.40 3 38045995 38050535

Neighbor

gene id symbol gene type direction distance location
si:dkey-11p23.7 NA coding downstream 191173 37851161 ~ 37854822 (-)
mrps12 mrps12 coding downstream 315929 37725589 ~ 37730066 (-)
LOC120562468 NA coding downstream 350589 37693717 ~ 37695406 (-)
LOC120562948 NA coding downstream 360382 37682235 ~ 37685613 (-)
LOC120562949 NA coding downstream 370982 37672821 ~ 37675013 (-)
LOC120563013 NA coding upstream 161285 38211820 ~ 38230481 (-)
dcst1 NA coding upstream 179023 38229558 ~ 38250551 (-)
LOC120563006 NA coding upstream 274747 38325282 ~ 38327753 (-)
LOC120563000 NA coding upstream 284949 38335484 ~ 38337715 (-)
LOC120563004 NA coding upstream 293543 38344078 ~ 38346701 (-)
G79479 NA non-coding downstream 11144 38034213 ~ 38034851 (-)
G79478 NA non-coding downstream 21184 38024597 ~ 38024811 (-)
LOC120562672 NA non-coding downstream 134870 37905582 ~ 37911125 (-)
G79463 NA non-coding downstream 146011 37891935 ~ 37899984 (-)
G79448 NA non-coding downstream 179948 37826824 ~ 37866047 (-)
G79483 NA non-coding upstream 7577 38058112 ~ 38058431 (-)
G79486 NA non-coding upstream 31196 38081731 ~ 38087507 (-)
G79490 NA non-coding upstream 40119 38090654 ~ 38091796 (-)
G79491 NA non-coding upstream 49766 38100301 ~ 38100928 (-)
G79492 NA non-coding upstream 59384 38109919 ~ 38112627 (-)
LOC120562474 NA other downstream 74647 37958449 ~ 37971348 (-)
LOC120562472 NA other downstream 249229 37744084 ~ 37796766 (-)
LOC120561551 NA other downstream 526601 37492800 ~ 37519394 (-)
LOC120562574 NA other downstream 810866 37088824 ~ 37235129 (-)
kiaa0319 LOC103370079 other downstream 1151357 36867667 ~ 36894638 (-)
G79484 NA other upstream 13163 38063698 ~ 38221760 (-)
LOC120562477 NA other upstream 89934 38140469 ~ 38205182 (-)
LOC120562482 NA other upstream 268409 38318944 ~ 38324284 (-)
LOC120562485 NA other upstream 466066 38516601 ~ 38522389 (-)
nudt17 nudt17 other upstream 615732 38666267 ~ 38680480 (-)

Expression


Co-expression Network