trnai-aau_16


Basic Information

Item Value
gene id trnai-aau_16
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 4103275 ~ 4103352 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_295
GGCCCGGTTAGCTCAGGTGGTTAGAGCGTGGTGCTAATAACGCGCAAGGTCATGGGTTCGGAATCCCCATACTGGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_295 True 78 tRNA 0.58 1 4103275 4103352

Neighbor

gene id symbol gene type direction distance location
LOC120561648 LOC106523394 coding upstream 213217 3889015 ~ 3890058 (+)
ebag9 ebag9 coding upstream 230375 3854146 ~ 3872900 (+)
tent5aa LOC104929946,LOC103354291,LOC100698511,LOC103388593 coding upstream 599387 3499187 ~ 3503888 (+)
prss35 prss35,LOC104949834 coding upstream 934101 3163016 ~ 3169174 (+)
prdm13 prdm13,LOC102783984 coding upstream 1256329 2840205 ~ 2846946 (+)
seh1l seh1l coding downstream 360085 4463437 ~ 4472667 (+)
cep192 cep192 coding downstream 370654 4474006 ~ 4571309 (+)
LOC120562920 mc5r,LOC101487483,LOC100693278,LOC102795483 coding downstream 843006 4946358 ~ 5065673 (+)
LOC120562247 NA coding downstream 1252455 5355807 ~ 5357294 (+)
LOC120561876 NA coding downstream 1709525 5812877 ~ 5814642 (+)
G70503 NA non-coding upstream 7617 4095448 ~ 4095658 (+)
G70496 NA non-coding upstream 13206 4084720 ~ 4090069 (+)
G70495 NA non-coding upstream 22066 4080917 ~ 4081209 (+)
LOC120561653 NA non-coding upstream 63927 4037931 ~ 4039348 (+)
G70466 NA non-coding upstream 176230 3926692 ~ 3927045 (+)
G70507 NA non-coding downstream 11613 4114965 ~ 4115274 (+)
G70518 NA non-coding downstream 58152 4161504 ~ 4161741 (+)
G70523 NA non-coding downstream 70788 4174140 ~ 4174388 (+)
G70525 NA non-coding downstream 104209 4207561 ~ 4249240 (+)
G70542 NA non-coding downstream 294950 4398302 ~ 4398547 (+)
trnai-aau_15 NA other upstream 967 4102236 ~ 4102308 (+)
gdf6a gdf6,gdf6a,LOC104931979,LOC100693017,LOC102300803,LOC101484183,LOC102790179,LOC101068913 other upstream 186857 3909276 ~ 3916418 (+)
G70460 NA other upstream 209348 3874445 ~ 3893927 (+)
LOC120561654 NA other upstream 467445 3634973 ~ 3635830 (+)
LOC120561848 NA other upstream 475594 3625938 ~ 3627681 (+)
trnar-ucg_9 NA other downstream 278 4103630 ~ 4103702 (+)
trnai-aau_17 NA other downstream 963 4104315 ~ 4104388 (+)
trnar-ucg_10 NA other downstream 1315 4104667 ~ 4104739 (+)
trnai-aau_18 NA other downstream 2005 4105357 ~ 4105430 (+)
trnai-aau_19 NA other downstream 4256 4107608 ~ 4107681 (+)

Expression


Co-expression Network