trnar-acg_16


Basic Information

Item Value
gene id trnar-acg_16
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 17368703 ~ 17368775 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_351
GGGCCAGTGGCGCAATGGATAACGCGTCTGACTACGGATCAGAAGATTCTAGGTTCGACTCCTGGCTGGCTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_351 True 73 tRNA 0.58 1 17368703 17368775

Neighbor

gene id symbol gene type direction distance location
mrpl13 mrpl13 coding upstream 206005 17149825 ~ 17162698 (+)
LOC120562784 cpq coding upstream 239090 17109876 ~ 17129613 (+)
LOC120562623 NA coding upstream 261026 17095056 ~ 17107677 (+)
mrs2 mrs2,LOC105917271 coding upstream 274827 17079407 ~ 17093876 (+)
LOC120561713 ptk2 coding upstream 303626 16995309 ~ 17065077 (+)
LOC120561781 tmem158,LOC102794155 coding downstream 66399 17435174 ~ 17436804 (+)
cdcp1a NA coding downstream 70318 17439093 ~ 17445194 (+)
wdtc1 wdtc1,LOC102795681 coding downstream 106793 17475568 ~ 17484853 (+)
LOC120562051 tmem222 coding downstream 117391 17486166 ~ 17489474 (+)
LOC120562050 LOC103366409 coding downstream 120821 17489596 ~ 17491941 (+)
G72862 NA non-coding upstream 302792 17065589 ~ 17065911 (+)
G72879 NA non-coding upstream 376714 16991716 ~ 16991989 (+)
G72859 NA non-coding upstream 405863 16959788 ~ 16962840 (+)
G72852 NA non-coding upstream 637659 16730837 ~ 16731044 (+)
G72801 NA non-coding upstream 874128 16494237 ~ 16494575 (+)
G73019 NA non-coding downstream 23493 17392268 ~ 17403627 (+)
G73027 NA non-coding downstream 59053 17427828 ~ 17463027 (+)
LOC120562054 NA non-coding downstream 131814 17500589 ~ 17504921 (+)
G73186 NA non-coding downstream 555175 17923950 ~ 17926628 (+)
G73216 NA non-coding downstream 745940 18114715 ~ 18116323 (+)
G72750 LOC104952694,LOC106925895 other upstream 1296502 16018359 ~ 16072201 (+)
irx4a LOC103360443,LOC102233360,LOC103478376,LOC108232226,LOC101474805,LOC102784018,LOC102295185,LOC102202030,LOC104961814,LOC103145173 other upstream 1808411 15553464 ~ 15560292 (+)
LOC120561718 LOC107101581 other upstream 2735982 14626478 ~ 14632721 (+)
G72506 NA other upstream 2942523 14425794 ~ 14426180 (+)
LOC120562174 rbms3,LOC101066789,LOC103370884 other upstream 2998612 14175817 ~ 14370091 (+)
G73031 LOC103366415 other downstream 80810 17449585 ~ 17452568 (+)
ubxn11 NA other downstream 87868 17456643 ~ 17461118 (+)
G73123 phactr4 other downstream 276738 17645513 ~ 17647186 (+)
paqr7b LOC107588505,LOC104938075,LOC103388542 other downstream 382155 17750930 ~ 17779130 (+)
kcnn4 kcnn4,LOC104953880,LOC100704922 other downstream 1030281 18399056 ~ 18420721 (+)

Expression


Co-expression Network