trnap-agg_5


Basic Information

Item Value
gene id trnap-agg_5
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 33631642 ~ 33631713 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_357
ggctcgttggtctaggggtatgattctcgcttAGGGTGCGAGAGgtcccgggttcaaatcccggACGAGCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_357 True 72 tRNA 0.61 1 33631642 33631713

Neighbor

gene id symbol gene type direction distance location
trnap-agg_4 NA coding upstream 532 33631039 ~ 33631110 (+)
nt5c3a nt5c3a coding upstream 2697 33605846 ~ 33628945 (+)
trnap-agg_3 NA coding upstream 5640 33625931 ~ 33626002 (+)
dctn3 dctn3,LOC102785116 coding upstream 65365 33557251 ~ 33566277 (+)
prdm1a prdm1,LOC103362578,LOC100706221 coding upstream 141968 33473172 ~ 33489674 (+)
bbs9 bbs9,LOC102784155 coding downstream 928 33632641 ~ 33822829 (+)
mettl6 mettl6 coding downstream 274677 33906390 ~ 33911214 (+)
LOC120562644 NA coding downstream 285286 33916999 ~ 33919175 (+)
LOC120562646 NA coding downstream 290865 33922578 ~ 33935943 (+)
LOC120562692 NA coding downstream 452382 34084095 ~ 34088746 (+)
G78000 NA non-coding upstream 43386 33564020 ~ 33588256 (+)
LOC120561935 NA non-coding upstream 43550 33583805 ~ 33588092 (+)
G78002 NA non-coding upstream 113127 33515709 ~ 33518515 (+)
G78001 NA non-coding upstream 137982 33493424 ~ 33493660 (+)
G77993 NA non-coding upstream 171407 33460022 ~ 33460235 (+)
G78052 NA non-coding downstream 291280 33922993 ~ 33923230 (+)
G78054 NA non-coding downstream 306546 33938259 ~ 33938468 (+)
G78055 NA non-coding downstream 319060 33950773 ~ 33951005 (+)
G78117 NA non-coding downstream 331081 33962794 ~ 33963092 (+)
LOC120561795 NA non-coding downstream 353136 33984849 ~ 33987987 (+)
G77888 NA other upstream 530108 33100413 ~ 33101534 (+)
LOC120561717 NA other upstream 1210170 32405133 ~ 32421472 (+)
G77682 tbx20 other upstream 1651733 31976318 ~ 31979909 (+)
G77447 NA other upstream 2495496 31134829 ~ 31136146 (+)
rab5ab rab5a,LOC104947906,LOC103388351,LOC105936747,LOC100704868,LOC101078239,LOC104931780 other upstream 2900033 30687338 ~ 30731609 (+)
bmper bmper other downstream 194374 33826087 ~ 33879132 (+)
LOC120562157 NA other downstream 262647 33894360 ~ 33904285 (+)
sh3bp5b sh3bp5,LOC102783023 other downstream 358829 33990542 ~ 34042648 (+)
G78200 NA other downstream 897642 34529355 ~ 34544379 (+)
LOC120562567 NA other downstream 1207444 34839157 ~ 34856532 (+)

Expression


Co-expression Network