Gene
RNA
| Item | Value |
|---|---|
| gene id | G80885 |
| gene name | lamb1,LOC100707779 |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053119.1 |
| NCBI id | CM020916.1 |
| chromosome length | 42187026 |
| location | 120277 ~ 121906 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| lamb1 | An extracellular matrix structural constituent. Involved in several processes, including endodermal cell differentiation; neurogenesis; and substrate adhesion-dependent cell spreading. Located in basement membrane and extracellular space. Part of laminin complex. Implicated in autistic disorder and lissencephaly 5. |
| description |
|---|
| PREDICTED: laminin subunit beta-1 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU108675 | True | 343 | lncRNA | 0.62 | 2 | 120277 | 121906 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120563419 | LOC107396773,LOC105929669,LOC106928452,LOC101167703,LOC102224045,LOC103152536 | coding | upstream | 78589 | 200495 ~ 202927 (-) |
| LOC120563420 | LOC106928452,LOC103152536,LOC101167703,LOC103466313,LOC102224045,LOC107092639,LOC107396773,LOC105929669 | coding | upstream | 97020 | 218926 ~ 221857 (-) |
| LOC120563696 | LOC102781631 | coding | upstream | 152856 | 274762 ~ 288762 (-) |
| LOC120563704 | NA | coding | upstream | 259631 | 381537 ~ 441542 (-) |
| LOC120563705 | NA | coding | upstream | 326148 | 448054 ~ 472724 (-) |
| G80866 | NA | non-coding | downstream | 61099 | 58374 ~ 59178 (-) |
| G80886 | NA | non-coding | upstream | 32314 | 154220 ~ 155503 (-) |
| G80895 | NA | non-coding | upstream | 42041 | 163947 ~ 165030 (-) |
| G80898 | NA | non-coding | upstream | 56123 | 178029 ~ 178738 (-) |
| LOC120564464 | NA | non-coding | upstream | 84651 | 206557 ~ 213727 (-) |
| G81047 | NA | non-coding | upstream | 217635 | 339541 ~ 484224 (-) |
| LOC120564180 | NA | other | downstream | 54399 | 52479 ~ 65878 (-) |
| G80889 | NA | other | upstream | 18783 | 140689 ~ 148955 (-) |
| LOC120563695 | nup160 | other | upstream | 132544 | 254450 ~ 290260 (-) |
| LOC120563703 | frs2,LOC102791683,LOC102194035,LOC101482686,LOC101062095 | other | upstream | 243719 | 365625 ~ 380890 (-) |
| tbc1d15 | tbc1d15 | other | upstream | 354683 | 476589 ~ 519373 (-) |
| G81072 | LOC106573129,LOC106561542 | other | upstream | 408343 | 530249 ~ 531894 (-) |
