G81456


Basic Information

Item Value
gene id G81456
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 1063118 ~ 1064072 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU109698
TCAGAGGCCTCGTGTCTCGTTTCTTCTCCTACTGACTCGTTTCCTCTCCTACTGActcgtttcctctcctcctgtcttgtttcctctcctcctgtctcGTTTCTTCTACTAATGTctcgtttcctctcctcGTGTCTCGTTTCCTCTCCTACTGTCTCGTTTCCTCTCCTACTGTCTCGTTTCTTCTCCTACTGTCTCGTTTCTTCTCCTACTGTCTCATTTCCTCTCCTCATGTCTCGTTTCCTCTCCTCGTGTCTCGTTTCCTCTCCTCGTGTCTCGTTTCCTCTCCTACTGTCTCGTTTCCTCTCCTACTGACTTGTTTCCTCTCCTACtgactctttttctctcctactgactcgtttcctctcctactgactcgtttcctctcctcctgtctcGTTTCCTCTCCTAATGTCTCGTTTCCTCTCCTCGTGTCTCGTTTCCTCTCCTAATGTCTCGTTTCCTCTCCTCGTGTCTCGTTTCCTCTCCTGCTGACTCGTTTCCTCTCCTACTGActcgtttcctctcctcctgtctcGTTTCCTCTCCTAATGTCTCGTTTCCTCTCCTCGTGTCTCGTTTCCTCTTCTAATGTCTCGTTTCCTCTCCTCGTGTCTCGTTTCCTCTCCTACTGACTCGTTTCCTCTCCTACTGACTCGTTTCCTCTCCTACTGActcgtttcctctcctcctgacTCGTTTCCTCTCCTAATGTCTCGTTTCCTCTCCTCGTGTCTCGTTTCCTCTCCTACtgtcttgtttcctctcctacTGTCTCGTCTCCTTTTTAATCCAATCAGCTGCGAGGAAGGCTGATGACTCTTCCCCTCGGAGC
>TU109700
TCAGAGGCCTCGTGTCTCGTTTCTTCTCCTACTGACTCGTTTCCTCTCCTACTGActcgtttcctctcctcctgtcttgtttcctctcctcctgtctcGTTTCTTCTACTAATGTctcgtttcctctcctcctgacTCGTTTCCTCTCCTCGTGTCTCGTTTCCTCTCCTACTGTCTCGTTTCCTCTCCTACTGTCTCGTTTCTTCTCCTACTGTCTCGTTTCTTCTCCTACTGTCTCGTTTCTTCTCCTACTGTCTCATTTCCTCTCCTCATGTCTCGTTTCCTCTCCTCGTGTCTCGTTTCCTCTCCTCGTGTCTCGTTTCCTCTCCTACTGTCTCGTTTCCTCTCCTACTGACTTGTTTCCTCTCCTACtgactctttttctctcctactgactcgtttcctctcctactgactcgtttcctctcctcctgtctcGTTTCCTCTCCTAATGTCTCGTTTCCTCTCCTCGTGTCTCGTTTCCTCTCCTAATGTCTCGTTTCCTCTCCTCGTGTCTCGTTTCCTCTCCTGCTGACTCGTTTCCTCTCCTACTGActcgtttcctctcctcctgactcgtttcctctcctcctgtctcGTTTCCTCTCCTAATGTCTCGTTTCCTCTCCTCGTGTCTCGTTTCCTCTTCTAATGTCTCGTTTCCTCTCCTCGTGTCTCGTTTCCTCTCCTACTGACTCGTTTCCTCTCCTACTGACTCGTTTCCTCTCCTACTGActcgtttcctctcctcctgacTCGTTTCCTCTCCTAATGTCTCGTTTCCTCTCCTCGTGTCTCGTTTCCTCTCCTACtgtcttgtttcctctcctacTGTCTCGTCTCCTTTTTAATCCAATCAGCTGCGAGGAAGGCTGATGACTCTTCCCCTCGGAGC

Function

GO:

id name namespace
GO:0045739 positive regulation of DNA repair biological_process
GO:0080135 regulation of cellular response to stress biological_process
GO:2001020 regulation of response to DNA damage stimulus biological_process
GO:2001022 positive regulation of response to DNA damage stimulus biological_process
GO:0051052 regulation of DNA metabolic process biological_process
GO:0051054 positive regulation of DNA metabolic process biological_process
GO:0045935 positive regulation of nucleobase-containing compound metabolic process biological_process
GO:0006282 regulation of DNA repair biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109698 False 835 lncRNA 0.50 3 1063118 1064072
TU109700 True 895 lncRNA 0.50 2 1063118 1064072

Neighbor

gene id symbol gene type direction distance location
LOC120564601 rps17,LOC107389132,LOC108428414 coding downstream 78956 967695 ~ 984162 (-)
LOC120564813 NA coding downstream 80755 982236 ~ 982363 (-)
LOC120564812 NA coding downstream 86110 976881 ~ 977008 (-)
LOC120564811 NA coding downstream 88585 974406 ~ 974533 (-)
LOC120564810 NA coding downstream 92507 970484 ~ 970611 (-)
LOC120563352 LOC102080071,LOC102210666,LOC102302880,LOC101466024 coding upstream 4717 1068789 ~ 1088673 (-)
si:ch211-59o9.10 NA coding upstream 88180 1152252 ~ 1177870 (-)
LOC120563572 NA coding upstream 117434 1181506 ~ 1194264 (-)
sycp3 sycp3 coding upstream 131851 1195923 ~ 1203372 (-)
zgc:101783 NA coding upstream 185725 1249797 ~ 1264054 (-)
G81446 NA non-coding downstream 30174 1022582 ~ 1032944 (-)
G81448 NA non-coding downstream 53869 1008882 ~ 1009249 (-)
G81447 NA non-coding downstream 55673 1007008 ~ 1007445 (-)
G81435 NA non-coding downstream 103523 938390 ~ 959595 (-)
LOC120563618 NA non-coding downstream 150345 902195 ~ 912773 (-)
G81457 NA non-coding upstream 458 1064530 ~ 1064837 (-)
G81459 NA non-coding upstream 1374 1065446 ~ 1066913 (-)
G81464 NA non-coding upstream 35626 1099698 ~ 1162667 (-)
G81476 NA non-coding upstream 54236 1118308 ~ 1120240 (-)
G81475 NA non-coding upstream 65853 1129925 ~ 1132665 (-)
G81445 NA other downstream 17606 1004039 ~ 1045512 (-)
glsl NA other downstream 127774 806744 ~ 935344 (-)
LOC120563708 LOC106561532 other downstream 231374 719054 ~ 831744 (-)
LOC120563709 LOC103365992,LOC102289231 other downstream 263394 726856 ~ 799724 (-)
G81085 NA other downstream 500839 561663 ~ 562279 (-)
actr6 actr6 other upstream 140722 1204794 ~ 1235228 (-)
ambra1b ambra1 other upstream 182864 1246936 ~ 1768910 (-)
LOC120563578 LOC108241855,LOC108242154,LOC107380983 other upstream 282173 1346245 ~ 1374380 (-)
G81535 NA other upstream 406756 1470828 ~ 1472927 (-)
kcnj11l LOC103374924,LOC108251025,LOC106531031,LOC103466804,LOC106904500,LOC103148617,LOC102236473,LOC100711429,LOC101469628,LOC102296518,LOC102199411 other upstream 474067 1538139 ~ 1548184 (-)

Expression


Co-expression Network