G81459


Basic Information

Item Value
gene id G81459
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 1065446 ~ 1066913 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU109703
TTTCTCATAATTACGAAATCTTTTCCAAAATTACGAAATCTTTTCTCAAAATTACGAAATCTTTTCTCAAAATTACGAAATCTTTTCCAAAATTACGAGATCTTTTCTCAATATTACGAAATCTTTTCCAAAATTACGAAATCTTTTCTCATAATTACGAGATCTTTTCTCAAAATTACGAAATCTTTTCCAAAATTACGAGATCTTTTCTCAAAATTACGAAATCTTTTCTCAATATTACGAGATCTTTTCTCAAAATTACGAGTACTTTTGAGCTCGTAATTAGAGATGCGtggattacaactttctaggctgaTTCCAATttgcgattttctttgagttaggccagccgataccgatttaaTTTTTTCCAACCACTTTAGGATCTCATAATTACATCTTTTCTCAATATTACGAGATCTTTTTTCATAATTACGAAATCTTTTTTCAATATTACGAAATCTTTTTTCAATATTACGAAATCTTTTCCAATATTACGAGATCTTTTTTCAATATTACGAAATCTTTTCCAATATTACGAGATCTTTTTTCAATATTACGAAATCTTTTCCAATATTACGAGATCTTTTCTCAATATTACGAGTAGTTATTGGCCGGTTCTAGcgttgctctttagatgtgtgtgaatgtcccacaccaggagtaattcatatagttctatttcatagtgatccattatctgttcaacacatgttctattaaagaaaagatagaaaatacatatttgtgtgtgctgtaaagtggttagaaaatctGAAATCGGAATTGGCCTAGAAAATTATGTTATTTTCTCGATATTACGAGATAAGGTGTTCTATGGTGAATTTAATACGCTTCCGTAAAAATGTCCCCCTGTTCACCTTTTGATTTCTGGGTCTGACTGTATTCgaacacaacaacaaattaaTATTCGGTGATCGTTAGTGTATCCAGGAGACTCCTGTGTCGTTGCAttagaaacattttatttatttatttaaaaaaaactctataAATGTATGTTTGTAAAACTTAGGAATCTGCAGCTCTGCACACATCTCTGCttgtatttttacaaaacatttattaataaaAGTCAGTTTTTCTAGATCTACAAAGCGCCAGAATTCAGaacatttgtaaaaaataaaa
>TU109704
ATCTTTTCTCAAAATTACGAAATCTTTTCTCAAAATTACGAGATCTTTTCTCAAAATTACGAAATCTTTTCTCAATATTACGAGATCTTTTCTCAAAATTACGAGTACTTTTGAGCTCGTAATTAGAGATGCGtggattacaactttctaggctgaTTCCAATttgcgattttctttgagttaggccagccgataccgatttaaTTTTTTCCAACCACTTTAGGATCTCATAATTACATCTTTTCTCAATATTACGAGATCTTTTTTCATAATTACGAAATCTTTTTTCAATATTACGAAATCTTTTTTCAATATTACGAAATCTTTTCCAATATTACGAGATCTTTTTTCAATATTACGAAATCTTTTCCAATATTACGAGATCTTTTTTCAATATTACGAAATCTTTTCCAATATTACGAGATCTTTTCTCAATATTACGAGTAGTTATTGGCCGGTTCTAGcgttgctctttagatgtgtgtgaatgtcccacaccaggagtaattcatatagttctatttcatagtgatccattatctgttcaacacatgttctattaaagaaaagatagaaaatacatatttgtgtgtgctgtaaagtggttagaaaatctGAAATCGGAATTGGCCTAGAAAATTATGTTATTTTCTCGATATTACGAGATAAGGTGTTCTATGGTGAATTTAATACGCTTCCGTAAAAATGTCCCCCTGTTCACCTTTTGATTTCTGGGTCTGACTGTATTCgaacacaacaacaaattaaTATTCGGTGATCGTTAGTGTATCCAGGAGACTCCTGTGTCGTTGCAttagaaacattttatttatttatttaaaaaaaactctataAATGTATGTTTGTAAAACTTAGGAATCTGCAGCTCTGCACACATCTCTGCttgtatttttacaaaacatttattaataaaAGTCAGTTTTTCTAGATCTACAAAGCGCCAGAATTCAGaacatttgtaaaaaataaaa

Function

GO:

id name namespace
GO:0006082 organic acid metabolic process biological_process
GO:0009069 serine family amino acid metabolic process biological_process
GO:0009070 serine family amino acid biosynthetic process biological_process
GO:1901605 alpha-amino acid metabolic process biological_process
GO:1901607 alpha-amino acid biosynthetic process biological_process
GO:0046394 carboxylic acid biosynthetic process biological_process
GO:0043436 oxoacid metabolic process biological_process
GO:0044283 small molecule biosynthetic process biological_process
GO:0008652 cellular amino acid biosynthetic process biological_process
GO:0006563 L-serine metabolic process biological_process
GO:0006564 L-serine biosynthetic process biological_process
GO:0019752 carboxylic acid metabolic process biological_process
GO:0016053 organic acid biosynthetic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109703 True 1152 lncRNA 0.30 3 1065446 1066826
TU109704 False 992 lncRNA 0.31 3 1065446 1066913

Neighbor

gene id symbol gene type direction distance location
LOC120564601 rps17,LOC107389132,LOC108428414 coding downstream 81284 967695 ~ 984162 (-)
LOC120564813 NA coding downstream 83083 982236 ~ 982363 (-)
LOC120564812 NA coding downstream 88438 976881 ~ 977008 (-)
LOC120564811 NA coding downstream 90913 974406 ~ 974533 (-)
LOC120564810 NA coding downstream 94835 970484 ~ 970611 (-)
LOC120563352 LOC102080071,LOC102210666,LOC102302880,LOC101466024 coding upstream 1876 1068789 ~ 1088673 (-)
si:ch211-59o9.10 NA coding upstream 85339 1152252 ~ 1177870 (-)
LOC120563572 NA coding upstream 114593 1181506 ~ 1194264 (-)
sycp3 sycp3 coding upstream 129010 1195923 ~ 1203372 (-)
zgc:101783 NA coding upstream 182884 1249797 ~ 1264054 (-)
G81457 NA non-coding downstream 609 1064530 ~ 1064837 (-)
G81456 NA non-coding downstream 1374 1063118 ~ 1064072 (-)
G81446 NA non-coding downstream 32502 1022582 ~ 1032944 (-)
G81448 NA non-coding downstream 56197 1008882 ~ 1009249 (-)
G81447 NA non-coding downstream 58001 1007008 ~ 1007445 (-)
G81464 NA non-coding upstream 32785 1099698 ~ 1162667 (-)
G81476 NA non-coding upstream 51395 1118308 ~ 1120240 (-)
G81475 NA non-coding upstream 63012 1129925 ~ 1132665 (-)
G81497 NA non-coding upstream 126962 1193875 ~ 1292564 (-)
G81499 NA non-coding upstream 169817 1236730 ~ 1237745 (-)
G81445 NA other downstream 19934 1004039 ~ 1045512 (-)
glsl NA other downstream 130102 806744 ~ 935344 (-)
LOC120563708 LOC106561532 other downstream 233702 719054 ~ 831744 (-)
LOC120563709 LOC103365992,LOC102289231 other downstream 265722 726856 ~ 799724 (-)
G81085 NA other downstream 503167 561663 ~ 562279 (-)
actr6 actr6 other upstream 137881 1204794 ~ 1235228 (-)
ambra1b ambra1 other upstream 180023 1246936 ~ 1768910 (-)
LOC120563578 LOC108241855,LOC108242154,LOC107380983 other upstream 279332 1346245 ~ 1374380 (-)
G81535 NA other upstream 403915 1470828 ~ 1472927 (-)
kcnj11l LOC103374924,LOC108251025,LOC106531031,LOC103466804,LOC106904500,LOC103148617,LOC102236473,LOC100711429,LOC101469628,LOC102296518,LOC102199411 other upstream 471226 1538139 ~ 1548184 (-)

Expression


Co-expression Network