G81550


Basic Information

Item Value
gene id G81550
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 1515040 ~ 1616805 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU109813
tgtattcccgacattttacatttattaaacacAGTCATCTTGATTTTATAAAACTCTTAAAACAACAGCGTAGTATCTTCATGCAGTAAAACATTGTGTATATCTGAAGTACTTTAAGACTAAACTTTGGCTGGAAACACTCAAACGTGAAGCTAAATCTGCCAAAAGTCTCCATcgtttagaaaataaaaacaacttagAAACTGAAAGATCAAGTTTTGAGCTCGAACTTTGAAAACTACAAACTATGTATTCAAACTCACATTCAGGGTAGTTTTCAGGTTAAATATCATTTAGATCAGTTATGAAACTCAGAACTGATctaaaagttaaaaaacaagattttaatGTGAAAGCGGAAGAAATAAAACCCAAAAATATCTAAATATATACCAAGGTAGAAAATATAGGACATCATTTATTCAAAAAGGATTTAAGAAGTGAAACGAAAAATCATATTCATATTTTTCTACACTTATTTTTTagtttgaaaacagtcatacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacatagagacagacagagagacacacacacacagacagacacaacacagagagagacacacacacacacacacacacacacacacacacagagagagagacacaaacacacacaaacacacaaacacacacacacacacacacacacacacacacacacacacacacacagagatagacacagagggacacacgcacacacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaggtgtacgAGAAAGTTCCCTATCAGATCTTGATCTTTCAGATGTAAATGTCCTTTTCTAAGTGAAGGGAACGTTTGGCTCAGATTCAGCTCCATGAAGCCTCATGATGCCTCAGTGAATAAAACTTATAAATCATACAAATATAAACAACTTGCAGCCGgaaaacatgtaaacaaacatggCAAAGTAAAGTCTGGCATAGCAGGGTAGCACCTGTTCTTTTaaacgttgttttttttttacggttttTGCATTCGATCATCATGGCACAATCATCAAATTCAAGAGAAAAATACTCTCCTTAAAAACAGTTAACAATCTGTACAGTttatacaacatatatacacacacaagcattcCTGGTAGAAATATAGAGCCTTTATACATCCGTACGTGTTTCCGTCAGGCGCTACACCCCCCAATATCAACGGTCTCACACTGACCCATTGTTCCCGACTTATAACTGACTGGTGTTCTCGCAACAAGTGCTtaattattacacatttatcCCACCAGCttaattattaCACATATATCCCACCAGCTTAATTATTACACATATATCCCACCAGCttaattattatacatatatccCACCAGCttaattattatacatatatccCACCAGCTTAATTATTACACATATATCCCACCAGCAGGGCCACTGTGTCCCTCAGTGGAAGAAGTCAGTCAGAGGAGAAAGGTTTCAGCTGAGCGTGGACGGACCGGGACACAGCATTAAGCACTACGATTTatatttccaaaattaggccctatgttcccacatttctcacatttctaagatttgtttccaaaattaggccctatgttcccacatttctcacattactaagattattttcaaaattaggccctctgttcccacatttccaagatttgtttccaaaattaggccctatgttcccacattactATTATTTGATTCCAA
>TU109814
ACACACTCAGACacacacacagacacacacacagacacacacacagacacacacacagagacacacacagagacacacacacagacacacacacacacaaacacacacacacacacacacacacacacacacacacacacacacacagagatagacacagagggacacacgcacacacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaggtgtacgAGAAAGTTCCCTATCAGATCTTGATCTTTCAGATGTAAATGTCCTTTTCTAAGTGAAGGGAACGTTTGGCTCAGATTCAGCTCCATGAAGCCTCATGATGCCTCAGTGAATAAAACTTATAAATCATACAAATATAAACAACTTGCAGCCGgaaaacatgtaaacaaacatggCAAAGTAAAGTCTGGCATAGCAGGGTAGCACCTGTTCTTTTaaacgttgttttttttttacggttttTGCATTCGATCATCATGGCACAATCATCAAATTCAAGAGAAAAATACTCTCCTTAAAAACAGTTAACAATCTGTACAGTttatacaacatatatacacacacaagcattcCTGGTAGAAATATAGAGCCTTTATACATCCGTACGTGTTTCCGTCAGGCGCTACACCCCCCAATATCAACGGTCTCACACTGACCCATTGTTCCCGACTTATAACTGACTGGTGTTCTCGCAACAAGTGCTtaattattacacatttatcCCACCAGCttaattattaCACATATATCCCACCAGCTTAATTATTACACATATATCCCACCAGCttaattattatacatatatccCACCAGCttaattattatacatatatccCACCAGCTTAATTATTACACATATATCCCACCAGCAGGGCCACTGTGTCCCTCAGTGGAAGAAGTCAGTCAGAGGAGAAAGGTTTCAGCTGAGCGTGGACGGACCGGGACACAGCATTAAGCACTACGATTTatatttccaaaattaggccctatgttcccacatttctcacatttctaagatttgtttccaaaattaggccctatgttcccacatttctaagatttgtttccaaaattagaccctatgttcccacatttctcaCATTActaagattattttcaaaattaggccctctgttcccacatttccaagatttgtttccaaaattaggccctatgttcccacattactATGATTTGATTCCAAAATtagaccctatgttcccacattactATCATTTgattccaaaattaggccctatgttcccacatttctcacatttctaagatttgtttccaaaattaggccctatgttcccacattactATGATTTgattccaaaattaggccctatgttcccacattactATCATTTgattccaaaattaggccctatgttcccacattactATGATTTgattccaaaattaggccctatgttcccaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109813 True 1831 lncRNA 0.38 6 1515040 1519477
TU109814 False 1522 lncRNA 0.40 6 1516716 1616805

Neighbor

gene id symbol gene type direction distance location
LOC120563569 NA coding downstream 62760 1443627 ~ 1452280 (-)
zgc:101783 NA coding downstream 250986 1249797 ~ 1264054 (-)
sycp3 sycp3 coding downstream 311668 1195923 ~ 1203372 (-)
LOC120563572 NA coding downstream 320776 1181506 ~ 1194264 (-)
si:ch211-59o9.10 NA coding downstream 337170 1152252 ~ 1177870 (-)
chrm4b NA coding upstream 74564 1691369 ~ 1703414 (-)
nox5 nox5 coding upstream 172745 1789550 ~ 1859958 (-)
LOC120564319 NA coding upstream 174825 1791630 ~ 1794752 (-)
LOC120564320 NA coding upstream 200106 1816911 ~ 1820520 (-)
LOC120564321 NA coding upstream 207285 1824090 ~ 1826931 (-)
G81553 NA non-coding downstream 9245 1498640 ~ 1505795 (-)
G81528 LOC102787331,LOC106676141,LOC101484690,LOC102792843 non-coding downstream 105396 1387792 ~ 1409644 (-)
G81526 NA non-coding downstream 106284 1386656 ~ 1408756 (-)
G81496 NA non-coding downstream 213285 1246386 ~ 1301755 (-)
G81502 NA non-coding downstream 257106 1256769 ~ 1257934 (-)
G81580 NA non-coding upstream 23826 1640631 ~ 1641194 (-)
G81581 NA non-coding upstream 23915 1640720 ~ 1716591 (-)
G81586 NA non-coding upstream 64016 1680821 ~ 1682981 (-)
G81592 NA non-coding upstream 91236 1708041 ~ 1717246 (-)
G81609 NA non-coding upstream 245694 1862499 ~ 1862980 (-)
G81535 NA other downstream 42113 1470828 ~ 1472927 (-)
LOC120563578 LOC108241855,LOC108242154,LOC107380983 other downstream 140660 1346245 ~ 1374380 (-)
actr6 actr6 other downstream 279812 1204794 ~ 1235228 (-)
G81445 NA other downstream 469528 1004039 ~ 1045512 (-)
glsl NA other downstream 579696 806744 ~ 935344 (-)
G81655 NA other upstream 493816 2110621 ~ 2112849 (-)
G81726 LOC106531021,LOC102237407,LOC103130839,LOC107099816,LOC101479225,LOC103365994,LOC107389108,LOC106938894,LOC106907116,LOC103466381,LOC101173933 other upstream 1053510 2670315 ~ 2678513 (-)
G81738 NA other upstream 1068093 2684898 ~ 2685240 (-)
LOC120563733 NA other upstream 1135433 2752238 ~ 2819413 (-)
G81832 NA other upstream 1320947 2937752 ~ 2937990 (-)

Expression


Co-expression Network