G82174



Basic Information


Item Value
gene id G82174
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 3658831 ~ 3659199 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU110680
gtctgtattactatctttgtggggacatatcattgacataatgcattccctagccccttaccctaaccttaaccatcccaactgaatgcctaaccttaacccttaccctaaccttaaccatcccaactaaatgcctaaccttaacccttaccctcaccctaaccataacctaattctaaccctagtcctaaaaccaagtcttaaccctcaaacagccctttaaacttgtggggtccagcattttggtccccacgaggctgtgcagaccccacaagtatactgtagtccccggttttt
>TU110681
gtctgtattactatctttgtggggacatatcattgacataatgcattccctagccccttaccctaaccttaaccatcccaactgaatgcctaaccttaacccttaccctcaccctaaccataacctaattctaaccctagtcctaaaaccaagtcttaaccctcaaacagccctttaaacttgtggggtccagcattttggtccccacgaggctgtgcagaccccacaagtatactgtagtccccggttttt
>TU110683
gtctgtattactatctttgtggggacatatcattgacataatgcattccctagccccttaccctaaccttaaccatcccaactgaatgcctaaccttaacccttaccctaaccttaaccatcccaactaaatgcctaaccttaacccttaccctcaccctaaccataacctaattctaaccctagtcctaaaaccaagtcttaaccctcaaacagccctttaaacttgtggggtccagcattttggtccccacgaggctgtgcagaccccacaagtatactgtagtccccggttttt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU110680 True 297 lncRNA 0.45 2 3658831 3659199
TU110681 False 252 lncRNA 0.46 2 3658831 3659199
TU110683 False 297 lncRNA 0.45 2 3658831 3659199

Neighbor


gene id symbol gene type direction distance location
znf277 znf277 coding downstream 28016 3610411 ~ 3630815 (-)
ciao2a fam96a coding downstream 222526 3422286 ~ 3436305 (-)
rxfp3.3b LOC101063184,LOC103379777,LOC104955911,LOC100691599 coding downstream 485674 3170771 ~ 3173157 (-)
LOC120564581 LOC104961227 coding downstream 528784 3112306 ~ 3130047 (-)
LOC120564582 NA coding downstream 536240 3117852 ~ 3122591 (-)
lrrn3a lrrn3,LOC104963257 coding upstream 140378 3799577 ~ 3825591 (-)
LOC120564132 NA coding upstream 251845 3911044 ~ 3969786 (-)
dus2 dus2 coding upstream 322511 3981710 ~ 4010282 (-)
slc7a10b LOC103357197,LOC102205281 coding upstream 359895 4019094 ~ 4060242 (-)
LOC120564250 NA coding upstream 466428 4125627 ~ 4127757 (-)
G82162 NA non-coding downstream 125150 3533345 ~ 3533681 (-)
G82155 NA non-coding downstream 145817 3509167 ~ 3513014 (-)
G82137 NA non-coding downstream 154635 3502965 ~ 3504196 (-)
G82124 NA non-coding downstream 257163 3400930 ~ 3401668 (-)
G82123 NA non-coding downstream 264122 3386615 ~ 3394709 (-)
G82177 NA non-coding upstream 21036 3680235 ~ 3724153 (-)
G82184 NA non-coding upstream 114234 3773433 ~ 3774005 (-)
G82189 NA non-coding upstream 128803 3788002 ~ 3794232 (-)
G82194 NA non-coding upstream 157969 3817168 ~ 3817616 (-)
G82198 NA non-coding upstream 190471 3849670 ~ 3851935 (-)
G82147 NA other downstream 80447 3494391 ~ 3578384 (-)
G82122 NA other downstream 278303 3380027 ~ 3380528 (-)
fem1b fem1b,LOC102786726 other downstream 590910 3056539 ~ 3067921 (-)
G81832 NA other downstream 720841 2937752 ~ 2937990 (-)
LOC120563733 NA other downstream 839418 2752238 ~ 2819413 (-)
LOC120564247 NA other upstream 417179 4076378 ~ 4167786 (-)
G82246 NA other upstream 617621 4276820 ~ 4278359 (-)
urahb NA other upstream 1345193 5004392 ~ 5011941 (-)
faap24 LOC102781697 other upstream 1818025 5477224 ~ 5483533 (-)
LOC120563994 LOC103354574,LOC102783264,LOC102204057,LOC100698332,LOC104935123,LOC102307694,LOC101486521 other upstream 3514823 7174022 ~ 7197808 (-)

Expression



Co-expression Network