G82233


Basic Information

Item Value
gene id G82233
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 4137276 ~ 4229086 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU110788
agggacagatacaacaAAAACTTAGGTAAGCTTCAACAGTCATCTGATGTATGTATCAGTGTTTTTAGCCAAAGCTAATTCTCAACACTCGTCCCTAGTAGGGCTTTTggttataaataaaaatacagatttacattattattaaaaatacaataaagatgaaattaaaagaaattaaatgaaaaaggaaGGGAAGTATACAATGAGAGCACagtgtaaaaactaaatatgagAGCAAGATATGTGTGAGAGAAtcatagaataaaaaaataaataaaagcacagTCAAGAGTCAGGCAGTTTCTTATAATCCTAAAGCAGCCTAAGTTGGCCTTAACGGTTTTACAGATTTTCTTGATATGACTTTTGAAGTTCAACTGATAGTCTATAATTATTCCTAGATACTTAACATCAGGTACTTCAATAAGCTCCCCATTCATTTCTACATTCAAGAGCTGTGTTAgaggtagtttttttttatttattttttttatggaaaagcagacagtttgtttttttaagtgtttaaaGTTAAACAAGATGAAGCCAGCAAAGATAATATTTTTTCTAAGTTGACATTTAGTTTGTCTGCCACAGAAGTACAGGTATTATCAGATGCATACACcactgtgtcatctgcatacattTGTAGACCTATATCTGGATATACATCTGGCAAATCATTAATGTAAAGGCTGAAGAGTATGGGTCCCAAAACATTGCCCTGAGCGATCCCTGTTTCAATTTGGAGAACGGTGGATCTCACATTATTAATTATAACACACTGTTCATGGCCTTTTAAATATGATTCAAACCAGGACAATGACTGTTTGGATAAATTGAACTTGGCTAATTTTAAAATTAAGGTGTTATGATTTACTGCACCAACTACATTTCCCTTATCAAGtgattgtttgatattttcgGTTAATAAACAAATAGCGGATTCTGTTGAATGATTGTGCCTAAATCCAAATTGCAGAGAACTCCGATAATGGTTTGTAGCTTCTTTTGAGCTGAAAAAGCTTTGTTTAGAGTCTGTTTCTGCCTTAAATCTGACAGTTTTTTATCTGATCAGTGTTGAACCATGTCTTGCTTTCCGAACTTCACAATCCTGCCGGAGAAGAAGTTGTCTCAGTGAGCATCTCTGCAGCTtcatttctttctgctgctctcaCCAACACACTTGTGACTTTTGACATGACTGAGCTGAGAGAATCTTCTATCACAAACTGAACAACTAAATGGTTTCTCCCccgtgtggattctcatgtgtctcGTCAAATTGCTTTTGCTACTGAAACTTGTTTTACAAACTGAGCAGTTAAAAATTTTCCCTTCTGAATGAAGTTTCATGTGGTTCGTTAAGGCCTTCTTAAGAGAGAATCCTTTACCACAAACTGAACAATTTATTGGTTTCTTCCTTGTGTGGACAGCCAAGTGTCGTTTCAGATTTTTACTTTGTGCAAATCTTTTATCACAAACTGAGCAACTGAATGATTTCTCCCCGGTGTGGGAAGCCAAGTGTCGATTAAGATAATGCTTTTGTGCAAATCTTTTATCACAAACTGAGCAACTGAATGATTTCTCCCCGGTGTGGGAAGCCAAGTGTCGATTAAGATAATGCTTCTGTGCAAATCTTTTATCACATACTGAACAACTAAATAATTTCTCCCCAGTGTGGGAAGCCAGGTGTCGTGTCAGATGTTGCTTTAGTGCAAATTTTCTATCACAAACTGAGCAACTAAATGATTTCTCCCCAGTGTGGACAGTTAAGTGTTGTCTCAGAGTACAAGGGTGTGCAAATCCTTTACCACAAACTGAGCAACAATATGTTTTCCCTCCTTTCCCTCCTGTTTGGACTCCAGAGTTTTTCTGTAGAGGTTTCTTGCGTCTGGCACATTCAGAGGAGCTAACTGATGTGTTTCCAGTATTACATTCCACATCACTTACAGCTACTTCATTGTTTTGCAGAGGGTTTAAACCTGACTGAGGTTCCCTAGTCTCCTCTAAAACACAGCTGGCATCAGTCTGAGATTCAGAGGAGTTTGAAGTCTTGTCATGAGTAGCTGGTTGTAAAGGACTATCTGGATCTGAGTTcttggctggttctggtcctccacagtcctctccatcagcttctgttctctctgcctctctgttatCCTCAGTTTTGGTTTCATGAAGCTGTAAGGACTGAACTTTCTCTTTATCAtcttcttcactcttcacagggacaggagtgaacgGGAActtgatatcagcctcctccagctcttgaagctgctctccctcctgactggtcctgagttcctcctgttcctctttaatgtgtggggggggctctgggtcctcctggtccagactggagctccacttctgctgctcagggggaacctctgCTTTCACCACCGACAGCTGCTGGACGTCTGAGGAGAATAAggaaatacatgcacacagagaaaGCTGTTAGGAAACTGTAATGTCAGGTTGACACTTATTCATTAACCGACGCCAAAACTACATGTTTCATGTCATATTTAATATTTCCAGATCGTGCAGGAACAGTTATTGTTTGGAAGCAGAAAAATGCGCCGGTCCAATTGTAGACCATCCggaacttatttcaccagtaaatttcTGTTAAATTACAAAAACCGA
>TU110790
agggacagatacaacaAAAACTTAGGTAAGCTTCAACAGTCATCTGATGTATGTATCAGTGTTTTTAGCCAAAGCTAATTCTCAACACTCGTCCCTAGTAGGGCTTTTggttataaataaaaatacagatttacattattattaaaaatacaataaagatgaaattaaaagaaattaaatgaaaaaggaaGGGAAGTATACAATGAGAGCACagtgtaaaaactaaatatgagAGCAAGATATGTGTGAGAGAAtcatagaataaaaaaataaataaaagcacagTCAAGAGTCAGGCAGTTTCTTATAATCCTAAAGCAGCCTAAGTTGGCCTTAACGGTTTTACAGATTTTCTTGATATGACTTTTGAAGTTCAACTGATAGTCTATAATTATTCCTAGATACTTAACATCAGGTACTTCAATAAGCTCCCCATTCATTTCTACATTCAAGAGCTGTGTTAgaggtagtttttttttatttattttttttatggaaaagcagacagtttgtttttttaagtgtttaaaGTTAAACAAGATGAAGCCAGCAAAGATAATATTTTTTCTAAGTTGACATTTAGTTTGTCTGCCACAGAAGTACAGGTATTATCAGATGCATACACcactgtgtcatctgcatacattTGTAGACCTATATCTGGATATACATCTGGCAAATCATTAATGTAAAGGCTGAAGAGTATGGGTCCCAAAACATTGCCCTGAGCGATCCCTGTTTCAATTTGGAGAACGGTGGATCTCACATTATTAATTATAACACACTGTTCATGGCCTTTTAAATATGATTCAAACCAGGACAATGACTGTTTGGATAAATTGAACTTGGCTAATTTTAAAATTAAGGTGTTATGATTTACTGCACCAACTACATTTCCCTTATCAAGtgattgtttgatattttcgGTTAATAAACAAATAGCGGATTCTGTTGAATGATTGTGCCTAAATCCAAATTGCAGAGAACTCCGATAATGGTTTGTAGCTTCTTTTGAGCTGAAAAAGCTTTGTTTAGAGTCTGTTTCTGCCTTAAATCTGACAGTTTTTTATCTGATCAGTGTTGAACCATGTCTTGCTTTCCGAACTTCACAATCCTGCCGGAGAAGAAGTTGTCTCAGTGAGCATCTCTGCAGCTtcatttctttctgctgctctcaCCAACACACTTGTGACTTTTGACATGACTGAGCTGAGAGAATCTTCTATCACAAACTGAACAACTAAATGGTTTCTCCCccgtgtggattctcatgtgtctcGTCAAATTGCTTTTGCTACTGAAACTTGTTTTACAAACTGAGCAGTTAAAAATTTTCCCTTCTGAATGAAGTTTCATGTGGTTCGTTAAGGCCTTCTTAAGAGAGAATCCTTTACCACAAACTGAACAATTTATTGGTTTCTTCCTTGTGTGGACAGCCAAGTGTCGTTTCAGATTTTTACTTTGTGCAAATCTTTTATCACAAACTGAGCAACTGAATGATTTCTCCCCGGTGTGGGAAGCCAAGTGTCGATTAAGATAATGCTTTTGTGCAAATCTTTTATCACATACTGAACAACTAAATAATTTCTCCCCAGTGTGGGAAGCCAAGTGTCGTGTCAGATGTTGCTTTAGTGCAAATCTTCTATCACAAACTGAGCAACTAAATGATTTCTCCCCAGTGTGGACAGTTAAGTGTTGTCTCAGAGTACAAGGGTGTGCAAATCCTTTACCACAAAGTGAGCAGCAatgtgttttccctcctttccCTCCTGTTTGGACTCCAGAGTTTTTCTGTTGAGGTTTCTTGTGGCCAAAGCTTCCAGCACATTCAGAGGAGCTAACTGATGTGTTTCCAGTATTACATTCCACATCACTTACAGCTACTTCATTGTTTTGCAGAGGGTTTAAACCTGACTGAGGTTCCCTAGTCTCCTCCCAGTCTGCACTGTCATCAGTGTGAGATTCAGAGGAGTTTGAAGTCTTGTTATGAGTAGCTGGTTGTAAAGGACTATCTGGAtctgagttcctggctggttctggtcctccacagtcctctccatcagcttctgctctctctgcctctctgttctCCTCAGTTTGGCTTtcatgaagctgtgaggactgagctttctcttcatcatcttcgtcactcttcacagggacagaaGTGAACAGGAActtgatatcagcctcctccagcccttgaagctgctctccctcctgactggtccagagttcctcctgttcctctttaatgtgtgggggctCTGGGTCCTCCTGGTCCAGACTGGAGCgccactcctgctgctcagggggaacctctgCTTTCACCACcgacagctgctggacatctG
>TU110791
TTTAGGGAAACAGATGTACAACAATTCAAGTTTAACTTTGATTTAttcaaataaatgtatacaaaaagTGAATTCCTAAGCAACACAGTGCTTAGTTACCAAAACTGTGGCAAATATTGAAGTACAACCTTCAACTGCAGTTGGCTGAGCTTTACAACTGTTTATCATCCTTGCCATCCAACAGAAATTGACCAGATTAGAAGCCTTCTGTGATCAAGCATCAACCCCAGCCCTCCTCCAATAGTAACAAGGTTGAATACTTTGCTTGAGTTTCCTAACTGCTGATACCATAGAGCTGTATcctagaaaacaaaataaagacaaataaaaacagaattacAATGATCGTGTATTCATTTTAGCTGACAAAAAGCTTATTGTGAGGTCTGTAGCAGCCTTAAGTCTGACAGTTTATAGCTGATTAGTGTTGAACAAAGACTTGAACTCAGTACTTGACTAATTGTCTCAGCGAGCATCTCTCACCAACACACTTGTGACTTTTGACATGACTGAGCCGAGAGAATCTTCTATCACAAACTGAACAACTAAATCGTTTCTCCCCCATGTGGAGAATTAAGTGTTGTTTCAGATTTCCCTTTTGTGCAAAACTTTTACTACAAACTGAACAACTAAATGGTTTCTCCCCCATGTGGAGAATTAAGTGTTGTTTCAGATTTCCCTTTTGTGCAAATCTTTTACTACAAACTGAACAACTAAATAGTTTCTCCCCTGTGTGGACAATCAAATGTCTTTTCAGATGTTGCTTCAGATTGCTAGGGTCTGTAAATCGTTTACTACAAACTGAACAACTAAATGGTTTTTcccctgtgtggattctcatgtgtctaACCAAATTGCTAGGCGTACTGAAACTTGCTTTACAAACTGAACAGGTGAGACATTTTTCTTCTGAATGAAGTCTCATGTGAGTCGTTAAGGTTTTTTTACGAAGGTATCTTTTACCACAAACTGAGCAACAAAATGATTTCCCTCCTGTTTGGACTCCAGAGTGGTTCTGCAGAGGTTTCTTGTGGCCAAAGCTTCCAGCACATTCAGAGGAGCTAACTGATGTGTTTCCAGTGTTACATTCCAGATCACTTACAGCTACTTCATTGTTTTGCAGAGGGTTTAAACCTGACTGAGGTTCCCTAGTCTCCTCCCAGTctgcactgtcatcagtctcacaTTCAGAGGAGTCTGAAGTCTTGTCATGAGTAGCTGGTTGTAAAGGACTATCTGGAtctgagttcctggctggttctggtcctccccagtcctctccatcagcttctgctctctctgcctctctgttctCCTCAGTTTGGCTTtcatgaagctgtgaggactgagctttctcttcatcatcttcgtcactcttcacagggacagaaGTGAACAGGAActtgatatcagcctcctccagcccttgaagctgctctccctcctgactggtccagagttcctcctgttcctctttaatgtgtgggggctCTGGGTCCTCCTGGTCCAGACTGGAGCgccactcctgctgctcagggggaacctctgCTTTCACCACcgacagctgctggacatctG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU110788 True 2661 lncRNA 0.39 2 4137276 4216400
TU110790 False 2354 lncRNA 0.39 2 4200647 4216400
TU110791 False 1578 lncRNA 0.42 2 4200647 4229086

Neighbor

gene id symbol gene type direction distance location
LOC120564250 NA coding downstream 9519 4125627 ~ 4127757 (-)
slc7a10b LOC103357197,LOC102205281 coding downstream 77034 4019094 ~ 4060242 (-)
dus2 dus2 coding downstream 126994 3981710 ~ 4010282 (-)
LOC120564132 NA coding downstream 167490 3911044 ~ 3969786 (-)
lrrn3a lrrn3,LOC104963257 coding downstream 311685 3799577 ~ 3825591 (-)
prr33 NA coding upstream 389240 4618326 ~ 4629983 (-)
LOC120564256 myod1,LOC104930627 coding upstream 439396 4668482 ~ 4677370 (-)
zgc:172145 NA coding upstream 452264 4681350 ~ 4690529 (-)
LOC120564251 LOC103357242 coding upstream 683207 4912293 ~ 4925306 (-)
afg3l1 LOC100701252,LOC102294241,LOC102199323 coding upstream 755594 4984680 ~ 5004204 (-)
G82229 NA non-coding downstream 79977 4056974 ~ 4057299 (-)
G82225 NA non-coding downstream 94421 4033244 ~ 4042855 (-)
G82210 NA non-coding downstream 128847 3980005 ~ 4008429 (-)
G82220 NA non-coding downstream 137639 3997225 ~ 3999637 (-)
G82213 NA non-coding downstream 163638 3973186 ~ 3973638 (-)
G82280 NA non-coding upstream 33049 4262135 ~ 4316293 (-)
G82281 NA non-coding upstream 38788 4267874 ~ 4355562 (-)
G82288 NA non-coding upstream 66425 4295511 ~ 4295926 (-)
G82291 dld,LOC102778186 non-coding upstream 67753 4296839 ~ 4300962 (-)
G82296 NA non-coding upstream 106263 4335349 ~ 4338729 (-)
G82147 NA other downstream 558892 3494391 ~ 3578384 (-)
G82122 NA other downstream 756748 3380027 ~ 3380528 (-)
fem1b fem1b,LOC102786726 other downstream 1069355 3056539 ~ 3067921 (-)
G81832 NA other downstream 1199286 2937752 ~ 2937990 (-)
LOC120563733 NA other downstream 1317863 2752238 ~ 2819413 (-)
G82246 NA other upstream 47734 4276820 ~ 4278359 (-)
urahb NA other upstream 775306 5004392 ~ 5011941 (-)
faap24 LOC102781697 other upstream 1248138 5477224 ~ 5483533 (-)
LOC120563994 LOC103354574,LOC102783264,LOC102204057,LOC100698332,LOC104935123,LOC102307694,LOC101486521 other upstream 2944936 7174022 ~ 7197808 (-)
G83064 LOC100699133 other upstream 3058809 7287895 ~ 7291427 (-)

Expression


Co-expression Network