G82243


Basic Information

Item Value
gene id G82243
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 4097687 ~ 4270916 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU110806
cctgctctgtgtaacCGAAGCTGAGGGCTGAAAACAGCGTCCAGTAGTTTCTGTTGTCgctcgttctcctcttttgaacgacaaagttcctcctcgtactctgctatcgttctttcaaacagcccaaatatctcttcagcagccgcagttagtcgctgCTCCACCAACGCTCTCAGCATTTGGACTTTAGTCATTTTCACACAATGACAGAAACTTTTCCTCCGAAAAAACTCCgtcaaaaACACCGTTTGCTCTCCTTCTAACTGTGTTGCTAACCAGCTAGCATGCTAAGCTAGCGTTGATAATTTTTTAGCTACCGGGAGATGAGGTAAAACATTCAGGAAGAAGGTGAGCAGCACAAAGTCCATTCAGATTCAGACAGCTTTATCCGGACATACAGAGGCTCTGATGGATCAGTGCTGTTGGAgctcacacacacttcctcaGCACAACAAACCGACTCCGCTGTTTCTACTCACGTTACGACACCGTATTGCTCAAAGAGTAACATCCGGTTCTGCTGCAACTTGGTGGttaaccttcaaaataaaagttcttAAGCTTGACCTACAACAAACGTGACCTAATTTTAGCAACAGCCCActgttaaaatataatttatggTAGAATCAGACCAAACAATAACCTATACATTACATAAaagttatctttaaaaaaaaaagtgtgtagcAGAACAGAATGTACAAG
>TU110807
cctgctctgtgtaacCGAAGCTGAGGGCTGAAAACAGCGTCCAGTAGTTTCTGTTGTCgctcgttctcctcttttgaacgacaaagttcctcctcgtactctgctatcgttctttcaaacagcccaaatatctcttcagcagccgcagttagtcgctgctccaccaacgctctcagcatttggactttacacattttcacacaacgACAGAAACGTTTCCTCCGAACAAACTGCGTCAAAAACACCGTTTGCTCTCCTTCAAACTGTGTTGCTAACCAGCTAGCATGCTAAGCTAGCGTCGATAGCCTTTGTAGCTACCGGGAGATGAGACAGAGGTAAAACATTCAGGAAGAAGGTGAGCAGCACAAAGTCCATTCAGATTCAGACAGCTTTATCCGGACATACAGAGGCTCTGATGGATCAGTGCTGTTGGAgctcacacacacttcctcaGCACAACAAACCGACTCCGCTGTTTCTACTCACGTTACGACACCGTATTGCTCAAAGAGTAACATCCGGTTCTGCTGCAACTTGGTGGttaaccttcaaaataaaagttcttAAGCTTGACCTACAACAAACGTGACCTAATTTTAGCAACAGCCCActgttaaaatataatttatggTAGAATCAGACCAAACAATAACCTATACATTACATAAaagttatctttaaaaaaaaaagtgtgtagcAGAACAGAATGTACAAG

Function

GO: NA

KEGG:

id description
ko00240 Pyrimidine metabolism
ko03013 Nucleocytoplasmic transport
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU110806 False 708 lncRNA 0.43 2 4097687 4129293
TU110807 True 715 lncRNA 0.44 3 4097687 4270916

Neighbor

gene id symbol gene type direction distance location
slc7a10b LOC103357197,LOC102205281 coding downstream 37445 4019094 ~ 4060242 (-)
dus2 dus2 coding downstream 87405 3981710 ~ 4010282 (-)
LOC120564132 NA coding downstream 127901 3911044 ~ 3969786 (-)
lrrn3a lrrn3,LOC104963257 coding downstream 272096 3799577 ~ 3825591 (-)
znf277 znf277 coding downstream 466872 3610411 ~ 3630815 (-)
prr33 NA coding upstream 347410 4618326 ~ 4629983 (-)
LOC120564256 myod1,LOC104930627 coding upstream 397566 4668482 ~ 4677370 (-)
zgc:172145 NA coding upstream 410434 4681350 ~ 4690529 (-)
LOC120564251 LOC103357242 coding upstream 641377 4912293 ~ 4925306 (-)
afg3l1 LOC100701252,LOC102294241,LOC102199323 coding upstream 713764 4984680 ~ 5004204 (-)
G82229 NA non-coding downstream 40388 4056974 ~ 4057299 (-)
G82225 NA non-coding downstream 54832 4033244 ~ 4042855 (-)
G82210 NA non-coding downstream 89258 3980005 ~ 4008429 (-)
G82220 NA non-coding downstream 98050 3997225 ~ 3999637 (-)
G82213 NA non-coding downstream 124049 3973186 ~ 3973638 (-)
G82288 NA non-coding upstream 24595 4295511 ~ 4295926 (-)
G82291 dld,LOC102778186 non-coding upstream 25923 4296839 ~ 4300962 (-)
G82296 NA non-coding upstream 64433 4335349 ~ 4338729 (-)
G82299 NA non-coding upstream 77138 4348054 ~ 4349074 (-)
G82307 NA non-coding upstream 91601 4362517 ~ 4364355 (-)
G82147 NA other downstream 519303 3494391 ~ 3578384 (-)
G82122 NA other downstream 717159 3380027 ~ 3380528 (-)
fem1b fem1b,LOC102786726 other downstream 1029766 3056539 ~ 3067921 (-)
G81832 NA other downstream 1159697 2937752 ~ 2937990 (-)
LOC120563733 NA other downstream 1278274 2752238 ~ 2819413 (-)
G82246 NA other upstream 5904 4276820 ~ 4278359 (-)
urahb NA other upstream 733476 5004392 ~ 5011941 (-)
faap24 LOC102781697 other upstream 1206308 5477224 ~ 5483533 (-)
LOC120563994 LOC103354574,LOC102783264,LOC102204057,LOC100698332,LOC104935123,LOC102307694,LOC101486521 other upstream 2903106 7174022 ~ 7197808 (-)
G83064 LOC100699133 other upstream 3016979 7287895 ~ 7291427 (-)

Expression


Co-expression Network