G82290


Basic Information

Item Value
gene id G82290
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 4386446 ~ 4388708 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU110869
tttttttgatttattagCATTTAATAGATAATAGTCGTGGCTCTAGTATGCAGCACTGGTCAAATTGTTATTCTTTGATTGGACACATCACTGATTAAAACAGATcttataaacatattttcttgGCAACATTGCGATATGGATTATGCGTGACCAAATGtttacaaatgttgaaaaaattaatCCTGTTGAGACtgaaacttgttttgttttggtggCGGCCCAACACAacaatgtaaacattttaattaacgTTGATCTGGTTATTCTAATGAGCATGTAAACATTTCCCTCATGTGTAAAATGTCATCAGCCAGACTTCCAAACAGGGTTCAACAGTTAAGGGTTTGCCCGATGGTAAGTAAACGTACCAACCCACTTGGCTGTTCAGTAACTTGCCCACGCTGGAGAATGCTTGTTGAATGGTttgatttaaagctatagtgcgtagtttctgtcgacccccccatgaggaattctaagtaatgacaacaaaactgtctgcgcgtccacatgatacaagccttctgtgatcgcgcaaCGCcttccccactctctctcctccacgCATGTTTTTTTTGGCGagtttttcatcactttttttcaacatttgacacttttgttgtcgtttttttttcacttttgggCACTGTTTTTTGGAGTAAATTTCAATTCAGTACGCTCTAGTTAAAATAAGTTGCTGTGTGTACTTTTGTTAATTCATAATCTCTTTATGACAAAGTTAGAAACATTATACCGAATGCCTACGAACTGTGTAAGAGGAATAATGTTGTACTTGCCCTTTAAGAGGGACGCactgtctctttaagagaaGCAGAAGAGAAATGTGCGTACttacaaaagagagagaaacatgctTGTATTTAACAGTGGCTATTTGTgctattaaagctatagtgcatagtttctgtatccccccccatgaggaattgtaAGTAAAGACAACAACgctgtcggtgcgtccacatgatacaagccttctgtgattaaaaacaaacatgattcagaagaggtcattatcttcactcgagtttctgcgcgggaaagtcaccggacaccACGATCTTCTGAATACAGTcacactgagaaatccagagagagttgtgtggagctgatagtcttaaatagctttggcaatggcttgaatgtaacggacgttcacttgtatcaaaaagttacgcactacagctttaaatgTGCTGTTGGCCAATCGAGATTTGAGTTGGCGGTAGTGACGCATGTCTTACGACAGTCTTGTTAGAAGATGACGGCGGCGTACGACAAGCTACAGTgaaaaatggttttaaaaaggtgctctaaactAGGCTacaacatctcactatctgctagctgtctgtcccctgaacacactgtaaaaaacatctcctcactatctgctagctgtctgtcccctgaacacactgtaaaaaacatctcctctctatctgctagctgtctgtcccctgaacacactgtaaaaatatcatctcactatctgctagctgtctgtcccctgaacacactgtaaaaatatcatctcactatctgctagctgtctgtcccctgaacacactgtaaaaatatctcctcactatctgctagctgtctgtcacccgacatcacttagagcacctttaaggatTTTCCTTGGTTGGTAGTGGAAGATGGAAATGAAACAACCAAATACCACAATTTTCTTAAGTCTTGGATGTTATTTGATAACGATTAATAcgattaattaaaaaaactctttgtaaaagggcaaataaaaatgtactttaacTTCCCCGACCAGGCAAAAACCTTAACGTTGAACCCTGCAAAAACAATaattcaaaacattaaaatacatatacaaccaaaaaatttttttttgcattttggacAACCCTGTTAGTGCAAAAATCCTCTCTTGCATCGTAAATCCTGGATGGCAGTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU110869 True 1962 lncRNA 0.39 2 4386446 4388708

Neighbor

gene id symbol gene type direction distance location
LOC120564250 NA coding downstream 258689 4125627 ~ 4127757 (-)
slc7a10b LOC103357197,LOC102205281 coding downstream 326204 4019094 ~ 4060242 (-)
dus2 dus2 coding downstream 376164 3981710 ~ 4010282 (-)
LOC120564132 NA coding downstream 416660 3911044 ~ 3969786 (-)
lrrn3a lrrn3,LOC104963257 coding downstream 560855 3799577 ~ 3825591 (-)
prr33 NA coding upstream 229618 4618326 ~ 4629983 (-)
LOC120564256 myod1,LOC104930627 coding upstream 279774 4668482 ~ 4677370 (-)
zgc:172145 NA coding upstream 292642 4681350 ~ 4690529 (-)
LOC120564251 LOC103357242 coding upstream 523585 4912293 ~ 4925306 (-)
afg3l1 LOC100701252,LOC102294241,LOC102199323 coding upstream 595972 4984680 ~ 5004204 (-)
G82313 NA non-coding downstream 8027 4378124 ~ 4378419 (-)
G82312 NA non-coding downstream 10996 4375222 ~ 4375450 (-)
G82311 NA non-coding downstream 14576 4371161 ~ 4371870 (-)
G82309 NA non-coding downstream 20791 4365442 ~ 4365655 (-)
G82308 NA non-coding downstream 21651 4364441 ~ 4364795 (-)
G82318 NA non-coding upstream 4720 4393428 ~ 4394096 (-)
G82320 NA non-coding upstream 29299 4418007 ~ 4418476 (-)
G82322 NA non-coding upstream 32948 4421656 ~ 4421938 (-)
G82328 NA non-coding upstream 66003 4454711 ~ 4455273 (-)
G82338 NA non-coding upstream 154501 4543209 ~ 4544910 (-)
G82246 NA other downstream 108087 4276820 ~ 4278359 (-)
LOC120564247 NA other downstream 218660 4076378 ~ 4167786 (-)
G82147 NA other downstream 808062 3494391 ~ 3578384 (-)
G82122 NA other downstream 1005918 3380027 ~ 3380528 (-)
fem1b fem1b,LOC102786726 other downstream 1318525 3056539 ~ 3067921 (-)
urahb NA other upstream 615684 5004392 ~ 5011941 (-)
faap24 LOC102781697 other upstream 1088516 5477224 ~ 5483533 (-)
LOC120563994 LOC103354574,LOC102783264,LOC102204057,LOC100698332,LOC104935123,LOC102307694,LOC101486521 other upstream 2785314 7174022 ~ 7197808 (-)
G83064 LOC100699133 other upstream 2899187 7287895 ~ 7291427 (-)
met met other upstream 3350206 7738914 ~ 7832871 (-)

Expression


Co-expression Network