G82296


Basic Information

Item Value
gene id G82296
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 4335349 ~ 4338729 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU110876
ctagcggtggcgctgccggtgttgcaccggactaaaacgatgcatgcacaaaaaatgcgttggcccacctatctacagctagaggagacctcacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagaccacacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagaccacacctatctacagctagaggagaccacacctatctacagctaggagagacctcacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagagg
>TU110877
ctagcggtggcgctgccggtgttgcaccggactaaaacgatgcatgcacaaaaaatgcgttggcccacctatctacagctagaggagacctcacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagaccacacctatctacagctagaggagacctcacctatctacagctaggggagacctcacctatctacagctagaggagaccacacctatctacagctagaggagacttcacctatctacagctaggggagaccacacctatctacagctagaggagacctcacctatctacagctagaggagacttcacctatctacagctagaggagacccacctacctacagctagaggagactccacctatctacagctagaggagacctcacctatctacagctagaggagacctcacctatctacagctagaggagactccacctatctacagctagaggagacccc
>TU110878
cctatctacagctagaggagacctcacctatctacagctagaggagacctcacctatctacagctaggggagacctcacctatctacagctaagggagaccccacctatctacagctaggggagacccccctcatctacagctagaggagaccccacctatctacagctaggggagaccacacctatctacagctagaggagacctcacctatctacagctagaggagaccacacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagacttcacctatctacagctagaggagactccacctatctacagctagaggagacctcacctatctacagctagaggagacctcacctatctacagct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU110876 False 397 lncRNA 0.52 2 4337449 4338729
TU110877 True 507 lncRNA 0.52 3 4335349 4338729
TU110878 False 403 lncRNA 0.52 2 4335569 4337883

Neighbor

gene id symbol gene type direction distance location
LOC120564250 NA coding downstream 207592 4125627 ~ 4127757 (-)
slc7a10b LOC103357197,LOC102205281 coding downstream 275107 4019094 ~ 4060242 (-)
dus2 dus2 coding downstream 325067 3981710 ~ 4010282 (-)
LOC120564132 NA coding downstream 365563 3911044 ~ 3969786 (-)
lrrn3a lrrn3,LOC104963257 coding downstream 509758 3799577 ~ 3825591 (-)
prr33 NA coding upstream 279597 4618326 ~ 4629983 (-)
LOC120564256 myod1,LOC104930627 coding upstream 329753 4668482 ~ 4677370 (-)
zgc:172145 NA coding upstream 342621 4681350 ~ 4690529 (-)
LOC120564251 LOC103357242 coding upstream 573564 4912293 ~ 4925306 (-)
afg3l1 LOC100701252,LOC102294241,LOC102199323 coding upstream 645951 4984680 ~ 5004204 (-)
G82280 NA non-coding downstream 19056 4262135 ~ 4316293 (-)
G82291 dld,LOC102778186 non-coding downstream 34387 4296839 ~ 4300962 (-)
G82288 NA non-coding downstream 39423 4295511 ~ 4295926 (-)
G82233 NA non-coding downstream 106263 4137276 ~ 4229086 (-)
LOC120564271 NA non-coding downstream 144168 4190055 ~ 4191181 (-)
G82299 NA non-coding upstream 9325 4348054 ~ 4349074 (-)
G82307 NA non-coding upstream 23788 4362517 ~ 4364355 (-)
G82308 NA non-coding upstream 25712 4364441 ~ 4364795 (-)
G82309 NA non-coding upstream 26713 4365442 ~ 4365655 (-)
G82311 NA non-coding upstream 32432 4371161 ~ 4371870 (-)
G82246 NA other downstream 56990 4276820 ~ 4278359 (-)
LOC120564247 NA other downstream 167563 4076378 ~ 4167786 (-)
G82147 NA other downstream 756965 3494391 ~ 3578384 (-)
G82122 NA other downstream 954821 3380027 ~ 3380528 (-)
fem1b fem1b,LOC102786726 other downstream 1267428 3056539 ~ 3067921 (-)
urahb NA other upstream 665663 5004392 ~ 5011941 (-)
faap24 LOC102781697 other upstream 1138495 5477224 ~ 5483533 (-)
LOC120563994 LOC103354574,LOC102783264,LOC102204057,LOC100698332,LOC104935123,LOC102307694,LOC101486521 other upstream 2835293 7174022 ~ 7197808 (-)
G83064 LOC100699133 other upstream 2949166 7287895 ~ 7291427 (-)
met met other upstream 3400185 7738914 ~ 7832871 (-)

Expression


Co-expression Network