G82320



Basic Information


Item Value
gene id G82320
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 4418007 ~ 4418476 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU110905
ttttactcacaacatgctaaccggcaacataggattccattcactacgctaagctaactagcggcagcgctgccggtgttgcaccggactaaaacgatgcatgcacaaaaaatgcgttggcccacctatctacagctaggggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagacctcacctatctacagctaggggagaccgtgataagccc
>TU110906
ttttactcacaacatgctaaccggcaacataggattccattcactacgctaagctaactagcggcagcgctgccggtgttgcaccggactaaaacgatgcatgcacaaaaaatgcgttggcccacctatctacagctaggggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagacctcacctatctacagctaggggagaccgtgataagccc
>TU110908
ttttactcacaacatgctaaccggcaacataggattccattcactacgctaagctaactagcggcagcgctgccggtgttgcaccggactaaaacgatgcatgcacaaaaaatgcgttggcccacctatctacagctaggggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagacctcacctatctacagctaggggagaccgtgataagccc
>TU110909
ttttactcacaacatgctaaccggcaacataggattccattcactacgctaagctaactagcggcagcgctgccggtgttgcaccggactaaaacgatgcatgcacaaaaaatgcgttggcccacctatctacagctaggggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagacctcacctatctacagctaggggagaccgtgataagccc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU110905 False 392 lncRNA 0.52 2 4418007 4418476
TU110906 False 366 lncRNA 0.52 3 4418007 4418476
TU110908 False 418 lncRNA 0.52 3 4418007 4418476
TU110909 True 444 lncRNA 0.51 2 4418007 4418476

Neighbor


gene id symbol gene type direction distance location
LOC120564250 NA coding downstream 290250 4125627 ~ 4127757 (-)
slc7a10b LOC103357197,LOC102205281 coding downstream 357765 4019094 ~ 4060242 (-)
dus2 dus2 coding downstream 407725 3981710 ~ 4010282 (-)
LOC120564132 NA coding downstream 448221 3911044 ~ 3969786 (-)
lrrn3a lrrn3,LOC104963257 coding downstream 592416 3799577 ~ 3825591 (-)
prr33 NA coding upstream 199850 4618326 ~ 4629983 (-)
LOC120564256 myod1,LOC104930627 coding upstream 250006 4668482 ~ 4677370 (-)
zgc:172145 NA coding upstream 262874 4681350 ~ 4690529 (-)
LOC120564251 LOC103357242 coding upstream 493817 4912293 ~ 4925306 (-)
afg3l1 LOC100701252,LOC102294241,LOC102199323 coding upstream 566204 4984680 ~ 5004204 (-)
G82318 NA non-coding downstream 23911 4393428 ~ 4394096 (-)
G82290 NA non-coding downstream 29299 4386446 ~ 4388708 (-)
G82313 NA non-coding downstream 39588 4378124 ~ 4378419 (-)
G82312 NA non-coding downstream 42557 4375222 ~ 4375450 (-)
G82311 NA non-coding downstream 46137 4371161 ~ 4371870 (-)
G82322 NA non-coding upstream 3180 4421656 ~ 4421938 (-)
G82328 NA non-coding upstream 36235 4454711 ~ 4455273 (-)
G82338 NA non-coding upstream 124733 4543209 ~ 4544910 (-)
G82339 NA non-coding upstream 126531 4545007 ~ 4545206 (-)
G82342 NA non-coding upstream 131250 4549726 ~ 4550017 (-)
G82246 NA other downstream 139648 4276820 ~ 4278359 (-)
LOC120564247 NA other downstream 250221 4076378 ~ 4167786 (-)
G82147 NA other downstream 839623 3494391 ~ 3578384 (-)
G82122 NA other downstream 1037479 3380027 ~ 3380528 (-)
fem1b fem1b,LOC102786726 other downstream 1350086 3056539 ~ 3067921 (-)
urahb NA other upstream 585916 5004392 ~ 5011941 (-)
faap24 LOC102781697 other upstream 1058748 5477224 ~ 5483533 (-)
LOC120563994 LOC103354574,LOC102783264,LOC102204057,LOC100698332,LOC104935123,LOC102307694,LOC101486521 other upstream 2755546 7174022 ~ 7197808 (-)
G83064 LOC100699133 other upstream 2869419 7287895 ~ 7291427 (-)
met met other upstream 3320438 7738914 ~ 7832871 (-)

Expression



Co-expression Network