G82342



Basic Information


Item Value
gene id G82342
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 4549726 ~ 4550017 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU110942
gttatttcagaagagtgtatcaaactggtagcccttcgtatgactcaatacccatgaagtagctctcagtttagaaaaggttggtgactcCTGActtagagtctctcaaaatctgatgaaaatcttttaaactgacctttgttgatctgaaataaagacagattcagcaactgcacggcctatttctctcttcaaatgttttcagaaacacgtttcggtgaactattttagtccaatatgagatatcgtattctgaacgagccgccacgacagtctggctttgaatttacgg

Function


GO: NA

KEGG:

id description
ko00830 Retinol metabolism
ko04977 Vitamin digestion and absorption

RNA


RNA id representative length rna type GC content exon number start site end site
TU110942 True 292 lncRNA 0.39 1 4549726 4550017

Neighbor


gene id symbol gene type direction distance location
LOC120564250 NA coding downstream 421969 4125627 ~ 4127757 (-)
slc7a10b LOC103357197,LOC102205281 coding downstream 489484 4019094 ~ 4060242 (-)
dus2 dus2 coding downstream 539444 3981710 ~ 4010282 (-)
LOC120564132 NA coding downstream 579940 3911044 ~ 3969786 (-)
lrrn3a lrrn3,LOC104963257 coding downstream 724135 3799577 ~ 3825591 (-)
prr33 NA coding upstream 68309 4618326 ~ 4629983 (-)
LOC120564256 myod1,LOC104930627 coding upstream 118465 4668482 ~ 4677370 (-)
zgc:172145 NA coding upstream 131333 4681350 ~ 4690529 (-)
LOC120564251 LOC103357242 coding upstream 362276 4912293 ~ 4925306 (-)
afg3l1 LOC100701252,LOC102294241,LOC102199323 coding upstream 434663 4984680 ~ 5004204 (-)
G82339 NA non-coding downstream 4520 4545007 ~ 4545206 (-)
G82338 NA non-coding downstream 4816 4543209 ~ 4544910 (-)
G82328 NA non-coding downstream 94453 4454711 ~ 4455273 (-)
G82322 NA non-coding downstream 127788 4421656 ~ 4421938 (-)
G82320 NA non-coding downstream 131250 4418007 ~ 4418476 (-)
G82358 NA non-coding upstream 30485 4580502 ~ 4580832 (-)
G82368 NA non-coding upstream 86202 4636219 ~ 4636549 (-)
G82369 NA non-coding upstream 88146 4638163 ~ 4638441 (-)
G82374 NA non-coding upstream 122518 4672535 ~ 4673502 (-)
G82377 NA non-coding upstream 156262 4706279 ~ 4706603 (-)
G82246 NA other downstream 271367 4276820 ~ 4278359 (-)
LOC120564247 NA other downstream 381940 4076378 ~ 4167786 (-)
G82147 NA other downstream 971342 3494391 ~ 3578384 (-)
G82122 NA other downstream 1169198 3380027 ~ 3380528 (-)
fem1b fem1b,LOC102786726 other downstream 1481805 3056539 ~ 3067921 (-)
urahb NA other upstream 454375 5004392 ~ 5011941 (-)
faap24 LOC102781697 other upstream 927207 5477224 ~ 5483533 (-)
LOC120563994 LOC103354574,LOC102783264,LOC102204057,LOC100698332,LOC104935123,LOC102307694,LOC101486521 other upstream 2624005 7174022 ~ 7197808 (-)
G83064 LOC100699133 other upstream 2737878 7287895 ~ 7291427 (-)
met met other upstream 3188897 7738914 ~ 7832871 (-)

Expression



Co-expression Network