G82554



Basic Information


Item Value
gene id G82554
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 4758149 ~ 4765669 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU111223
ttttagattcctcaaagtagccaccctttgctttttttattaataagggaaaaacttccactaatgaaccctgacaaagcacacctgtgaaggtaaaaccatttcaggtgactacctcatgaagctcattgagagaacaccaagggtttgcagagttatcaaaaaaaagcaaagggtggctactttgaagaatctaaaatataagacatgttttcagttatttcacacttttttgttaagtacataattccatatgtgttcattcatagttttgatgccttcagtg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU111223 True 286 lncRNA 0.35 2 4758149 4765669

Neighbor


gene id symbol gene type direction distance location
zgc:172145 NA coding downstream 67620 4681350 ~ 4690529 (-)
LOC120564256 myod1,LOC104930627 coding downstream 80779 4668482 ~ 4677370 (-)
prr33 NA coding downstream 128166 4618326 ~ 4629983 (-)
LOC120564250 NA coding downstream 630392 4125627 ~ 4127757 (-)
slc7a10b LOC103357197,LOC102205281 coding downstream 697907 4019094 ~ 4060242 (-)
LOC120564251 LOC103357242 coding upstream 146624 4912293 ~ 4925306 (-)
afg3l1 LOC100701252,LOC102294241,LOC102199323 coding upstream 219011 4984680 ~ 5004204 (-)
LOC120564005 NA coding upstream 402817 5168486 ~ 5222677 (-)
rfwd3 rfwd3 coding upstream 465875 5231544 ~ 5258261 (-)
LOC120564558 NA coding upstream 497800 5263469 ~ 5283349 (-)
G82378 NA non-coding downstream 48669 4709143 ~ 4709480 (-)
G82377 NA non-coding downstream 51546 4706279 ~ 4706603 (-)
G82374 NA non-coding downstream 84647 4672535 ~ 4673502 (-)
G82369 NA non-coding downstream 119708 4638163 ~ 4638441 (-)
G82368 NA non-coding downstream 121600 4636219 ~ 4636549 (-)
G82560 NA non-coding upstream 22590 4788259 ~ 4788463 (-)
G82572 NA non-coding upstream 93587 4859256 ~ 4859940 (-)
G82593 NA non-coding upstream 247124 5012793 ~ 5013762 (-)
G82592 NA non-coding upstream 248721 5014390 ~ 5047680 (-)
G82595 NA non-coding upstream 321793 5087462 ~ 5087728 (-)
G82246 NA other downstream 479790 4276820 ~ 4278359 (-)
LOC120564247 NA other downstream 590363 4076378 ~ 4167786 (-)
G82147 NA other downstream 1179765 3494391 ~ 3578384 (-)
G82122 NA other downstream 1377621 3380027 ~ 3380528 (-)
fem1b fem1b,LOC102786726 other downstream 1690228 3056539 ~ 3067921 (-)
urahb NA other upstream 238723 5004392 ~ 5011941 (-)
faap24 LOC102781697 other upstream 711555 5477224 ~ 5483533 (-)
LOC120563994 LOC103354574,LOC102783264,LOC102204057,LOC100698332,LOC104935123,LOC102307694,LOC101486521 other upstream 2408353 7174022 ~ 7197808 (-)
G83064 LOC100699133 other upstream 2522226 7287895 ~ 7291427 (-)
met met other upstream 2973245 7738914 ~ 7832871 (-)

Expression



Co-expression Network