G82599



Basic Information


Item Value
gene id G82599
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 5130775 ~ 5131097 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU111284
caacaacataaaaacaataaaaccagcaGCCAAATTAAATGTGATATTATTAGAGGCTGAAGGTtttttgggtaacactttacttgaaggtatttacataagagtgacatgacactgtcatgacactgtcatgacacatgaaccctaactctaaccataacttgtcatgactaAAACCGAGAGAGAttggggatgacatgcagctaaagggcagcaggtcggactcaaacctggaccgctgcaaaggactcagcccaCACGGGGCGCAAGCTCTTACTGGGTGACCTAGAGGTCGCCcctgaatgacacttactaaaagaagc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU111284 True 323 lncRNA 0.44 1 5130775 5131097

Neighbor


gene id symbol gene type direction distance location
afg3l1 LOC100701252,LOC102294241,LOC102199323 coding downstream 126571 4984680 ~ 5004204 (-)
LOC120564251 LOC103357242 coding downstream 205469 4912293 ~ 4925306 (-)
zgc:172145 NA coding downstream 440246 4681350 ~ 4690529 (-)
LOC120564256 myod1,LOC104930627 coding downstream 453405 4668482 ~ 4677370 (-)
prr33 NA coding downstream 500792 4618326 ~ 4629983 (-)
LOC120564005 NA coding upstream 37389 5168486 ~ 5222677 (-)
rfwd3 rfwd3 coding upstream 100447 5231544 ~ 5258261 (-)
LOC120564558 NA coding upstream 132372 5263469 ~ 5283349 (-)
LOC120564561 NA coding upstream 161683 5292780 ~ 5307882 (-)
LOC120563745 NA coding upstream 280129 5411226 ~ 5417693 (-)
G82595 NA non-coding downstream 43047 5087462 ~ 5087728 (-)
G82592 NA non-coding downstream 83095 5014390 ~ 5047680 (-)
G82593 NA non-coding downstream 117013 5012793 ~ 5013762 (-)
G82572 NA non-coding downstream 270835 4859256 ~ 4859940 (-)
G82560 NA non-coding downstream 342312 4788259 ~ 4788463 (-)
G82600 NA non-coding upstream 99 5131196 ~ 5132217 (-)
G82603 NA non-coding upstream 6339 5137436 ~ 5138317 (-)
G82607 NA non-coding upstream 14315 5145412 ~ 5145652 (-)
G82609 NA non-coding upstream 19884 5150981 ~ 5151212 (-)
G82616 NA non-coding upstream 79652 5210749 ~ 5626247 (-)
urahb NA other downstream 118834 5004392 ~ 5011941 (-)
G82246 NA other downstream 852416 4276820 ~ 4278359 (-)
LOC120564247 NA other downstream 962989 4076378 ~ 4167786 (-)
G82147 NA other downstream 1552391 3494391 ~ 3578384 (-)
G82122 NA other downstream 1750247 3380027 ~ 3380528 (-)
faap24 LOC102781697 other upstream 346127 5477224 ~ 5483533 (-)
LOC120563994 LOC103354574,LOC102783264,LOC102204057,LOC100698332,LOC104935123,LOC102307694,LOC101486521 other upstream 2042925 7174022 ~ 7197808 (-)
G83064 LOC100699133 other upstream 2156798 7287895 ~ 7291427 (-)
met met other upstream 2607817 7738914 ~ 7832871 (-)
cav1 cav1 other upstream 2716968 7848065 ~ 7861228 (-)

Expression



Co-expression Network