G82616


Basic Information

Item Value
gene id G82616
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 5210749 ~ 5626247 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU111303
GCTAATTATatagtttctattttttattatattcttattttatatttcatttgtACTTTTTTCTGTTCATCTATGCTTATTTCTGTCTTCCCCAATTTACACACTGTGGTTCAacaaaggcttatcttatcaaCACTGCCAACATTTTTATGTTAAATGTTGTTGAAGCTtcttcagttgaaaaaaaacctgATAAACATACAACTAGTCTCAATGCCAGCTTTATTATTGGTTATTTGAGTGTGAATTAAATAAGGCACATTCACCATTTTTAAACCATCcaaacatgaaaataaataaaaaaaaaaaaagaatacaaaaataattagGACCTCTGATTGGGGTTTGACATCTTTCCATCTTAAATAAGACACTGAAAGGTTACAAAGACGCTGCTTTGCTGGAGACTCAGTGAAtatttccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttctcaaaTACAGTAGACACATCGAAGGAGAGTGGAAACAAAACGGACGGTCGACCGTGAAAACACTGACCCACAGTTTTAGGGCTGAAGGTATCGCCAATGATTTCCCGAATCGATTCGATTGCATTTCCGATTCAATATCAGTTAGGTAACAGGACAATTTTTAGTCATAAAGCTAATTTTGCTTAGATATTAAAGATTCTCAGATATcttctgctgtaaattgtacaagcaaaAAGCAACCCTTGAATGTCTTTATAATGATGTCTACAATAAGAATTGACCCCCAAAAAAAGTTAGTTTAAAAGAACTTTTTGCTAATACATCCATTGTGAAAATGcaagtattaaaaaaatagatttcTAGATTTTATTAATCAAAATCGGATCacgttagggctgcacgatattaggaaaatatctaattgcgattattttgactgatattgcgattgcgaaattattcacgatattggagggaatggtCGTTTTTGTATCACTCATTTTcactgaaaaatataaaaaattaaaatatgaagtgtgatttttttgcgaggatctgtaccaaacaaagatgttttctgtagtctgtaggatacgattggtaggccgggacgtctccacagcaccacaatacttcattttagaacagtttgacacatat

Function

GO:

id name namespace
GO:0019538 protein metabolic process biological_process
GO:0006508 proteolysis biological_process

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption
ko05164 Influenza A

RNA

RNA id representative length rna type GC content exon number start site end site
TU111303 True 1118 lncRNA 0.33 2 5210749 5626247

Neighbor

gene id symbol gene type direction distance location
afg3l1 LOC100701252,LOC102294241,LOC102199323 coding downstream 206545 4984680 ~ 5004204 (-)
LOC120564251 LOC103357242 coding downstream 285443 4912293 ~ 4925306 (-)
zgc:172145 NA coding downstream 520220 4681350 ~ 4690529 (-)
LOC120564256 myod1,LOC104930627 coding downstream 533379 4668482 ~ 4677370 (-)
prr33 NA coding downstream 580766 4618326 ~ 4629983 (-)
LOC120564218 NA coding upstream 76412 5702659 ~ 5707653 (-)
LOC120564220 NA coding upstream 86821 5713068 ~ 5716665 (-)
LOC120564221 NA coding upstream 96617 5722864 ~ 5726731 (-)
aass aass coding upstream 265586 5891833 ~ 5935799 (-)
fezf1 fezf1,LOC100711330 coding upstream 316793 5943040 ~ 5953680 (-)
G82609 NA non-coding downstream 59537 5150981 ~ 5151212 (-)
G82607 NA non-coding downstream 65097 5145412 ~ 5145652 (-)
G82603 NA non-coding downstream 72432 5137436 ~ 5138317 (-)
G82600 NA non-coding downstream 78532 5131196 ~ 5132217 (-)
G82599 NA non-coding downstream 79652 5130775 ~ 5131097 (-)
G82687 NA non-coding upstream 15550 5641797 ~ 5644736 (-)
G82689 NA non-coding upstream 28767 5655014 ~ 5691020 (-)
G82749 NA non-coding upstream 157224 5783471 ~ 5829244 (-)
G82750 NA non-coding upstream 165979 5792226 ~ 5829326 (-)
G82755 NA non-coding upstream 210957 5837204 ~ 5837798 (-)
urahb NA other downstream 198808 5004392 ~ 5011941 (-)
G82246 NA other downstream 932390 4276820 ~ 4278359 (-)
LOC120564247 NA other downstream 1042963 4076378 ~ 4167786 (-)
G82147 NA other downstream 1632365 3494391 ~ 3578384 (-)
G82122 NA other downstream 1830221 3380027 ~ 3380528 (-)
LOC120563994 LOC103354574,LOC102783264,LOC102204057,LOC100698332,LOC104935123,LOC102307694,LOC101486521 other upstream 1547775 7174022 ~ 7197808 (-)
G83064 LOC100699133 other upstream 1661648 7287895 ~ 7291427 (-)
met met other upstream 2112667 7738914 ~ 7832871 (-)
cav1 cav1 other upstream 2221818 7848065 ~ 7861228 (-)
LOC120564711 NA other upstream 3916423 9542670 ~ 9551419 (-)

Expression


Co-expression Network