G83076 (LOC106958509,LOC107690788,LOC107671222,LOC107579420,LOC107569590)


Basic Information

Item Value
gene id G83076
gene name LOC106958509,LOC107690788,LOC107671222,LOC107579420,LOC107569590
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 7319959 ~ 7320292 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU111891
CTCGGGTTGAACCGGTTTAGCCTCCGAAGCCGTACAGGGTGCGGCCCTGCCTCTTCAGAGCGTAGACCACATCCATGGCGGTCACAGTCTTCCTCTTGGCGTGCTCGGTGTACGTGACTGCGTCACGGATCACGTTCTCCAGGAACACCTTCAGCACACCGCGGGTCTCCTCGTAGATGAGACCGGAGATACGCTTCACGCCGCCGCGGCGAGCCAGACGACGGATGGCGGGCTTGGTGATGCCCTGGATGTTATCACGGAGAACTTTCCGGTGACGCTTAGCGCCGCCTTTACCGAGTCCTTTGCCGCCCTTGCCTCTTCCACTCATGATTGC

Function

NR:

description
PREDICTED: transcriptional regulatory protein AlgP-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111891 True 334 lncRNA 0.61 1 7319959 7320292

Neighbor

gene id symbol gene type direction distance location
deaf1 deaf1,LOC102782684,LOC103354571 coding downstream 65047 7236721 ~ 7254912 (-)
LOC120563388 LOC104961227 coding downstream 218364 7096521 ~ 7101595 (-)
LOC120564807 LOC103357565,LOC100699937 coding downstream 289337 6968924 ~ 7030622 (-)
LOC120564637 LOC104958177 coding downstream 491638 6826664 ~ 6828321 (-)
LOC120564636 NA coding downstream 503616 6799443 ~ 6816343 (-)
LOC120564216 LOC104953183,LOC104935534 coding upstream 9189 7329481 ~ 7330643 (-)
cftr cftr coding upstream 200391 7520683 ~ 7562032 (-)
LOC120563753 st7 coding upstream 301441 7621733 ~ 7672632 (-)
LOC120564404 capza2,LOC106530899 coding upstream 370114 7690406 ~ 7722285 (-)
cav2 cav2 coding upstream 549076 7869368 ~ 7877712 (-)
G83075 NA non-coding downstream 601 7318778 ~ 7319358 (-)
G83070 LOC106609600,LOC102311591,LOC107737604 non-coding downstream 12848 7304343 ~ 7307111 (-)
G83065 NA non-coding downstream 23585 7291598 ~ 7296374 (-)
G83053 NA non-coding downstream 77298 7241958 ~ 7242661 (-)
G83052 NA non-coding downstream 80616 7238920 ~ 7239343 (-)
G83077 LOC108262407,LOC104935308,LOC104932967 non-coding upstream 3832 7324124 ~ 7326558 (-)
G83078 LOC105888650,LOC105896821,LOC101068541,LOC105891059,LOC107388332,LOC103395674,LOC108441241 non-coding upstream 7175 7327467 ~ 7327924 (-)
G83090 NA non-coding upstream 30623 7350915 ~ 7351184 (-)
G83091 NA non-coding upstream 31441 7351733 ~ 7351953 (-)
G83115 NA non-coding upstream 195692 7515984 ~ 7517486 (-)
G83064 LOC100699133 other downstream 28532 7287895 ~ 7291427 (-)
LOC120563994 LOC103354574,LOC102783264,LOC102204057,LOC100698332,LOC104935123,LOC102307694,LOC101486521 other downstream 122151 7174022 ~ 7197808 (-)
faap24 LOC102781697 other downstream 1836426 5477224 ~ 5483533 (-)
urahb NA other downstream 2308018 5004392 ~ 5011941 (-)
G82246 NA other downstream 3041600 4276820 ~ 4278359 (-)
met met other upstream 418622 7738914 ~ 7832871 (-)
cav1 cav1 other upstream 527773 7848065 ~ 7861228 (-)
LOC120564711 NA other upstream 2222378 9542670 ~ 9551419 (-)
LOC120563773 LOC102779219 other upstream 2574485 9894777 ~ 10050534 (-)
ppp1r15b LOC104921782,LOC104967023,LOC106964268,LOC103156571,LOC103465711,LOC102222546 other upstream 2747624 10067916 ~ 10072510 (-)

Expression


Co-expression Network