G83077 (LOC108262407,LOC104935308,LOC104932967)


Basic Information

Item Value
gene id G83077
gene name LOC108262407,LOC104935308,LOC104932967
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 7324124 ~ 7326558 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU111892
ttaaagagctttaTTCAAGgttttacaaattacaaattataggttacatttaaacatacaatGGGCCACGTTAAAACAATCAATAtaaacaatacaacaattaccaacatttaacaaaatgtgCAGATTGAGCTTAAAGTGCATCCAGAGCATGGAGAGTCTGATAAAGTGCAAATAGTCTTTTGTAAAGTgtgtagagtcttttataaagtgcatagagtATTTCATAAAGTGCATTTAGAGTCTTTCAAAAAAAGTGCTGAGGTTCACAAGTTCAAGTTGTCCCAAGGAAGGAACTGTTTTCTATCAAGGGTTCTTCTTCTCTCGAGCTCAGTGAGCACTTGTTTGCACACTTCATCGCTACTTATGAAAGTCTGTTGTATAGTCATACAACATCTAGATTTCCACAGcttcaaacaaacaatacatatGATTACTTGTAGTAGTTCCTTTTGTTTCTCTGATAGAGATTCATCAACAATACAGAACATCACAGATTTATATGAAAGTTCAAAATTTACACCATACACTAGGCCTACTAATTTGTCCCAGACCTCTTTAGATCTATAGCAGTCCATTAATAGATGCTGCTGTGTCTCATcttcattaataataataatgtctcATCTTGTGTTTCTCTCCAGAGGTCCCAAAATTAAAGTCACACaagtgcaacacacacacacacacacacacacacacacacacaggctctgcGGGGTCAGGCTGACATAGTTTTAGTCTTTGCTGAGGTGTTTTGGTTCATGATCACTGTATTTTTTCATGTACATTCAGAACTATCTGAAGGTACAAAATTGTAtgaaccatgttttttttttaaataacgtaATAGAAATAATACAGGTCTGTTTCCCAACAGGGAAAGGTCTGTTGTTCTTGAGGACTTTAAATGTACATGAAAGAGCTACAACACAGCCCACAGTTATTTTCATTGATTGTCATGTAAtcatgaaatgtcagaaaaaaataagTCCATCCCAGTTGTTTAATTAAAAACGAGGAGTTAATGtgcttactatataggtacctgtctaatgtatatgagagcatgtgTTGAggtttattttctgtattttgtggtcTTTGTAAAGCTGTGGAACGGACAGAGTCCAACACAAATTTCCCTTTCGGggacaatagacctttttcacggcagacatgttgacatgttatagtaggaaaagcacaggtgtattcaaaaccattactgatggctgcattccacttaggagagaccctggtattaaaccattactgatggctgcattccacttaggagaggccctggtattaaaccattactgatggctgcattccacttaggagaggtcctggtattaaaccattactgatggctgcatcacacttaggagaggccctggtattgtacatgctgactcactgggacacttgatggaactgagccatcattaaggttatcaatttcagctgtgcttttccaacaagtcaaaatgtctgctgtgaaaaaggtctataaagtatatcttatttAAGCATTAAGATCATGCCTTTGTcaccaaaacacagaaaatctAATTTTCCTCAGGCTGAAAACATTGACCTTCTGCAGCCATGTCGCATTAAGCTCTCAAAAGGATTGATTTTTATTGACCAACTAATAAATCATTCATCAGTTTGCTACAGCCCTAATGCAGACATTTGTACAACTACAAACGTTAATTTGGTGGCTaataggaaaaaataaaaataacctgTAAAGTGAACGACAAATCAGCAGGAAAGGAGCTCTCAGAATGAGTGggtggctcttaaaagagcctTTGGGTTGTTGGTGTAACAGCAGGGCTGTTTACTTGGAGCTGGTGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCAGCAGCAGCCTCACGGCGGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAGTGAGCCAGACGGGAAGCCTCCCCGGCGATGCGCTCAAAGATGTCGCTCACAAAGGAGTTCATGATGCCCATAGCCTTAGAGGAGATACCGGTGTCGGGGTGGACCTGCTTCAGCACTTTGTACACGTAGATAGCGTAGCTCTCCTTCCTGGACTTTCTCCTCTTCTTGCCGGTCTTGGTGGCTTTGGAGACGGCTTTCTTTGAGCCCTTCTTGGGCGCTTTGACTGGTTCAGCGGGCATGGTTGCTTCGTTCGGGATTCCCTCAAACGGATGACTCACTTTCACTCCGGACGGCTTCTCTTATATTCTC
>TU111893
ttaaagagctttaTTCAAGgttttacaaattacaaattataggttacatttaaacatacaatGGGCCACGTTAAAACAATCAATAtaaacaatacaacaattaccaacatttaacaaaatgtgCAGATTGAGCTTAAAGTGCATCCAGAGCATGGAGAGTCTGATAAAGTGCAAATAGTCTTTTGTAAAGTgtgtagagtcttttataaagtgcatagagtATTTCATAAAGTGCATTTAGAGTCTTTCAAAAAAAGTGCTGAGGTTCACAAGTTCAAGTTGTCCCAAGGAAGGAACTGTTTTCTATCAAGGGTTCTTCTTCTCTCGAGCTCAGTGAGCACTTGTTTGCACACTTCATCGCTACTTATGAAAGTCTGTTGTATAGTCATACAACATCTAGATTTCCACAGcttcaaacaaacaatacatatGATTACTTGTAGTAGTTCCTTTTGTTTCTCTGATAGAGATTCATCAACAATACAGAACATCACAGATTTATATGAAAGTTCAAAATTTACACCATACACTAGGCCTACTAATTTGTCCCAGACCTCTTTAGATCTATAGCAGTCCATTAATAGATGCTGCTGTGTCTCATcttcattaataataataatgtctcATCTTGTGTTTCTCTCCAGAGGTCCCAAAATTAAAGTCACACaagtgcaacacacacacacacacacacacacacacacacacaggctctgcGGGGTCAGGCTGACATAGTTTTAGTCTTTGCTGAGGTGTTTTGGTTCATGATCACTGTATTTTTTCATGTACATTCAGAACTATCTGAAGGTACAAAATTGTAtgaaccatgttttttttttaaataacgtaATAGAAATAATACAGGTCTGTTTCCCAACAGGGAAAGGTCTGTTGTTCTTGAGGACTTTAAATGTACATGAAAGAGCTACAACACAGCCCACAGTTATTTTCATTGATTGTCATGTAAtcatgaaatgtcagaaaaaaataagTCCATCCCAGTTGTTTAATTAAAAACGAGGAGTTAATGtgcttactatataggtacctgtctaatgtatatgagagcatgtgTTGAggtttattttctgtattttgtggtcTTTGTAAAGCTGTGGAACGGACAGAGTCCAACACAAATTTCCCTTTCGGggacaatagacctttttcacggcagacatgttgacatgttatagtaggaaaagcacaggtgtattcaaaaccattactgatggctgcattccacttaggagagaccctggtattaaaccattactgatggctgcattccacttaggagaggccctggtattaaaccattactgatggctgcattccacttaggagaggtcctggtattaaaccattactgatggctgcatcacacttaggagaggccctggtattgtacatgctgactcactgggacacttgatggaactgagccatcattaaggttatcaatttcagctgtgcttttccaacaagtcaaaatgtctgctgtgaaaaaggtctataaagtatatcttatttAAGCATTAAGATCATGCCTTTGTcaccaaaacacagaaaatctAATTTTCCTCAGGCTGAAAACATTGACCTTCTGCAGCCATGTCGCATTAAGCTCTCAAAAGGATTGATTTTTATTGACCAACTAATAAATCATTCATCAGTTTGCTACAGCCCTAATGCAGACATTTGTACAACTACAAACGTTAATTTGGTGGCTaataggaaaaaataaaaataacctgTAAAGTGAACGACAAATCAGCAGGAAAGGAGCTCTCAGAATGAGTGggtggctcttaaaagagcctTTGGGTTGTTGGTGTAACAGCAGGGCTGTTTACTTGGAGCTGGTGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCAGCAGCAGCCTCACGGCGGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAGTGAGCCAGACGGGAAGCCTCCCCGGCGATGCGCTCAAAGATGTCGCTCACAAAGGAGTTCATGATGCCCATAGCCTTAGAGGAGATACCGGTGTCGGGGTGGACCTGCTTCAGCACTTTGTACACGTAGATAGCGTAGCTCTCCTTCCTGGACTTTCTCCTCTTCTTGCCGGTCTTGGTGGCTTTGGAGACGGCTTTCTTTGAGCCCTTCTTGGGCGCTTTGACTGGTTCAGCGGGCATGGTTGCTTCGTTCGGGATTCCCTCAAACGGATGACTCACTTTCACTCCGGACGGCTTCTCTTATATTCTC

Function

NR:

description
PREDICTED: histone H2B-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111892 True 2294 lncRNA 0.41 3 7324124 7326558
TU111893 False 2294 lncRNA 0.41 3 7324124 7326558

Neighbor

gene id symbol gene type direction distance location
deaf1 deaf1,LOC102782684,LOC103354571 coding downstream 69212 7236721 ~ 7254912 (-)
LOC120563388 LOC104961227 coding downstream 222529 7096521 ~ 7101595 (-)
LOC120564807 LOC103357565,LOC100699937 coding downstream 293502 6968924 ~ 7030622 (-)
LOC120564637 LOC104958177 coding downstream 495803 6826664 ~ 6828321 (-)
LOC120564636 NA coding downstream 507781 6799443 ~ 6816343 (-)
LOC120564216 LOC104953183,LOC104935534 coding upstream 2923 7329481 ~ 7330643 (-)
cftr cftr coding upstream 194125 7520683 ~ 7562032 (-)
LOC120563753 st7 coding upstream 295175 7621733 ~ 7672632 (-)
LOC120564404 capza2,LOC106530899 coding upstream 363848 7690406 ~ 7722285 (-)
cav2 cav2 coding upstream 542810 7869368 ~ 7877712 (-)
G83076 LOC106958509,LOC107690788,LOC107671222,LOC107579420,LOC107569590 non-coding downstream 3832 7319959 ~ 7320292 (-)
G83075 NA non-coding downstream 4766 7318778 ~ 7319358 (-)
G83070 LOC106609600,LOC102311591,LOC107737604 non-coding downstream 17013 7304343 ~ 7307111 (-)
G83065 NA non-coding downstream 27750 7291598 ~ 7296374 (-)
G83053 NA non-coding downstream 81463 7241958 ~ 7242661 (-)
G83078 LOC105888650,LOC105896821,LOC101068541,LOC105891059,LOC107388332,LOC103395674,LOC108441241 non-coding upstream 909 7327467 ~ 7327924 (-)
G83090 NA non-coding upstream 24357 7350915 ~ 7351184 (-)
G83091 NA non-coding upstream 25175 7351733 ~ 7351953 (-)
G83115 NA non-coding upstream 189426 7515984 ~ 7517486 (-)
G83242 NA non-coding upstream 751593 8078151 ~ 8078429 (-)
G83064 LOC100699133 other downstream 32697 7287895 ~ 7291427 (-)
LOC120563994 LOC103354574,LOC102783264,LOC102204057,LOC100698332,LOC104935123,LOC102307694,LOC101486521 other downstream 126316 7174022 ~ 7197808 (-)
faap24 LOC102781697 other downstream 1840591 5477224 ~ 5483533 (-)
urahb NA other downstream 2312183 5004392 ~ 5011941 (-)
G82246 NA other downstream 3045765 4276820 ~ 4278359 (-)
met met other upstream 412356 7738914 ~ 7832871 (-)
cav1 cav1 other upstream 521507 7848065 ~ 7861228 (-)
LOC120564711 NA other upstream 2216112 9542670 ~ 9551419 (-)
LOC120563773 LOC102779219 other upstream 2568219 9894777 ~ 10050534 (-)
ppp1r15b LOC104921782,LOC104967023,LOC106964268,LOC103156571,LOC103465711,LOC102222546 other upstream 2741358 10067916 ~ 10072510 (-)

Expression


Co-expression Network