G83538


Basic Information

Item Value
gene id G83538
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 9511804 ~ 9512027 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU112473
GATAAACTCCAGCCTGTGCTGTTGACTTGTGATTTGACTATCAATTCAAAGTATAAATCAACACTGACAGTGTCTGAGTTAAATTCTGTAAACAGTATCACAGTGATGTGCCTGATGATGCCAAAAATGCAGCACGCCCAACTTGTTTCTATCACAGCTGACTGTTTCTGCTGTAAATCACCAtaaaagacacacaaatacaatcaTTGTTAGGTTTGCACCAC

Function

GO: NA

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU112473 True 224 lncRNA 0.39 1 9511804 9512027

Neighbor

gene id symbol gene type direction distance location
rpl27a rpl27a coding downstream 436 9506566 ~ 9511368 (-)
LOC120564823 NA coding downstream 1733 9509942 ~ 9510071 (-)
akip1 NA coding downstream 5701 9502922 ~ 9506103 (-)
znf143b znf143,LOC102798782 coding downstream 28513 9469193 ~ 9483291 (-)
wee1 wee1 coding downstream 43801 9461000 ~ 9468003 (-)
psma1 psma1 coding upstream 64561 9576588 ~ 9580452 (-)
LOC120563691 NA coding upstream 253835 9765862 ~ 9880590 (-)
rps13 rps13,LOC107586033,LOC107700620 coding upstream 560937 10072964 ~ 10076964 (-)
LOC120564824 NA coding upstream 561266 10073293 ~ 10073422 (-)
si:dkey-10o6.2 LOC104921785,LOC100704824,LOC102313177,LOC101482952,LOC102782089,LOC102213179 coding upstream 629756 10141783 ~ 10149106 (-)
G83477 NA non-coding downstream 149512 9359788 ~ 9362292 (-)
G83472 NA non-coding downstream 166219 9345176 ~ 9345585 (-)
G83471 LOC103366927 non-coding downstream 168578 9342081 ~ 9343226 (-)
G83445 NA non-coding downstream 272626 9238209 ~ 9239178 (-)
LOC120563400 NA non-coding downstream 395220 9114597 ~ 9116584 (-)
G83606 NA non-coding upstream 268608 9780635 ~ 9781114 (-)
G83609 LOC107690399,LOC105905572,LOC104946089 non-coding upstream 370208 9882235 ~ 9886966 (-)
G83610 NA non-coding upstream 376417 9888444 ~ 9888672 (-)
G83613 NA non-coding upstream 379357 9891384 ~ 9892755 (-)
G83669 nucb2 non-coding upstream 620720 10132747 ~ 10134745 (-)
cav1 cav1 other downstream 1650576 7848065 ~ 7861228 (-)
met met other downstream 1678933 7738914 ~ 7832871 (-)
G83064 LOC100699133 other downstream 2220377 7287895 ~ 7291427 (-)
LOC120563994 LOC103354574,LOC102783264,LOC102204057,LOC100698332,LOC104935123,LOC102307694,LOC101486521 other downstream 2313996 7174022 ~ 7197808 (-)
faap24 LOC102781697 other downstream 4028271 5477224 ~ 5483533 (-)
LOC120564711 NA other upstream 30643 9542670 ~ 9551419 (-)
LOC120563773 LOC102779219 other upstream 382750 9894777 ~ 10050534 (-)
ppp1r15b LOC104921782,LOC104967023,LOC106964268,LOC103156571,LOC103465711,LOC102222546 other upstream 555889 10067916 ~ 10072510 (-)
pik3c2a pik3c2a,LOC102781015 other upstream 566044 10078071 ~ 10129957 (-)
tdg.2 LOC104948407,LOC103366417 other upstream 662444 10174471 ~ 10180001 (-)

Expression


Co-expression Network