ppp1r15b (LOC104921782,LOC104967023,LOC106964268,LOC103156571,LOC103465711,LOC102222546)


Basic Information

Item Value
gene id ppp1r15b
gene name LOC104921782,LOC104967023,LOC106964268,LOC103156571,LOC103465711,LOC102222546
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 10067916 ~ 10072510 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU112618
ACCCCATGTGGGATTTGAATTAAAAATAGTCTACCCTGTAAATACAACAGAGCATTAAAATGGCTTTGATATATCTAGATGAAAGGTTAGATAAACGCAGCTGTTCCACTGTGGACTGAACAGCTTAAATTGGTAGTAATATAgccagtgtaaaaaaaacaaaaaaaacacgtttGAAGTCGATGTCTTTAGGTAGCTGAGACTTCTTTCTAATCAGTTTCATTAACCCAAGACACCGAACCCTACTGATCCTTTATTTGAAGtttacatgatttttttttttaatcttctgcTGACTGTTGTAATCTCTTGTGCTAAGATACGGTTAACTCCTGCCTCAGCTGACACATACTGCGCTGCACGGTGTGTTAAGCTGTGCTGTTGTTTGTTGTCGGTTAGCAACGGCCGCTGGTCGTCATGACTAAGCCAGGCATCTGACTCGAGCGAGTCATTAGAGAGTTCAACTTCCACGTTGGACTGAATGTGAAGTTGCAGCAGTATTGCTCGCTTTGAAATATCTTGCCAACTAATACCCTGTTTTATCAGACTCAAAAAATAAACCATAGTCTTATTCTTAGTCAGTCAGTGCTAGGAAACTTCATAactaatatgtatatattaggTTTTGATCCACATAAAACGTATCTCTGAGtggtaataatataataatttttctttttatagatGTTTAATGAGTCTTGTTGAAGGGTGCCTGAGGCCTAAGATTTTCTTTGCCAACGACTGCTTCTTTGTAATTGTTGAGAATAAAGACCTTAAAATGACTTAACATCAGTAGCAGGTGCAATTTTCTCCTCTGGTCCAAGTCCATGTCATGCGGACCTGGCCGTTTGCTCGCCAGGCGTCTCGTAAAGGACACTGGGAAGAAATGGCACGAGACCGGGACCGCTTCCGGAGGCGGGTCCAGGAAACGGAGCAGGCCATCGGCTACTGCTTCACCCAGCCCCACCGAGAGAAGATCCGGGCGTATCTGGACGGTGCcttgaaataaataacagtCCTGAACACTGaatgttttatttccttttcgGATGAGAACTTGTGATTGGTTGCAATGCAACAGTGATTTTGATTTTAGGCCAATTAGAAATTGGATGTTGGGCCAACCTTAATGTTCAGTGTCAAGTTGAACAACCTTGTACCTCAAAAGGTTTTATACATTTTGTGACTGTTGCACTGACTGACACTTTCTCCTATTAAGCTCAGCATTAACGTGTGGAATGTTGTTTTTGTATGCCTTATATACTGACCTAGTAATGTAACTTATTTATGCCCTATGgagcttgttttttttattttgtacttttggttttaactgtgtttttatatgtgtgaaaaaaaaaccagTGGTGAATCTAGAAGTTAAAAGTAGATAATGATGATATCGTAAGAAAGCAGAGCTTTACAGTACAAAGTGTTTGGAAAAGATTTTTGTTTAAGCATGATGTATAGATATGATGTTTTGGTGCAATTCTTGTCTTTTGTAGTGTTCAAATATTTAAGTTTTTGATATTTAagttttgtcttgtgttttcttatttggtgGCACATAATAGCAGCCTTTTAGCACCGAGTGTGGAGATGGAtatctttattattatattgaccGGAAAGATTCAAATACTTTGTCCTATGTGACTGGACTCAGCTCTTCATGGTAACGTCATGTAGACAGAAAGATGTCCCAAAACAAATTGTCTGTAGCAAATTTCTTATTAGGTGCTTTGCCAGATCAATAAAAT
>XM_039808901.1
GAATGGTGTTGCAATCTCGAGACATTCACCTCTTCAACAAcgaacacagcagacaaacaTGGAGAAAATATATGAGATTATTTGACGAAGGAGATCAAAATATGGCACCTACTTGCCGGAAAATGAAGCGACAGCACATCGACGCATATCTGTCACTGACAAATACGCGAAATCTGTTGGTTTTTGACGAGGAATACCAGAATACGTGAGGATTGTAATccaaattgaagaaaaaaaaatgtcgaCGGTCGTAGGTCCCGAGAAGGTTTCTGAACGGACGGCGATGGAGAGGTTCGGTAGCGGAGGGATGGCGCTTCTGCCTTGGACTAAACAGATGCTCACCGTACTTTGGGAACAGCTTCGGCTGCTGGTTCAAGTCATATACTACACCTTCATGTCAGTTTTCCAGATGTTCAGGTTTGAGGTTCACGTGAGAATCACCGACGAGACCGGTCAACACATCCAGCACATGACCACGGCAGCAAACCCAACCGAATCCTTCCTGTTCTCTTCGTTGTTTGACGGCGACAACGGAGTGATAGTTGGAGGCTCAAATCCCCTCTCTAACTTCTGTACTGACGTGGGCGACTCCTTCGCTGGGAAATCCACCGCCGAGGCCCTGCTGTCCACTCTACGTGCCGACGACCTGTGCTGCGGACTGGTGGATGATTTCGTGTCTGGCAAAGAAGACGGCATCTTTCTAGGACATCAATCCACTTGGAAAATGGGCTTCCCTGGCGACTGGAACATCTTTGTATCGAGCAGCGACAGCTCCAGCTCCAACGACAGCTGCCATAGAAGTAGTGAGAAAGTCTTTAAACAGGAAAATTCAGAAGAGGAGAAAGGTTTTCACTGGAGTAGCGAAGAAGACCAGAACATAGTCGAATTTGACAGTGAGGAAGGTAAGGCGCTTTGGGAGTCTCTGTCAAAATCTAGTGATCCTTACAACCCCTTCTTTTTCTCTGCATGCATTTCAACAAACACCATCATGGGGAAAAGTAAAGACAAAGGGATGGACAGTGACGCTGGCCTCGTGTCAGCGAGCAAGGCCAGCGAGGAGATGTTGGGGCCTCAAGGCCTGAACATCTGGGTCAGTCGATCTGACAGCGAGAGCAGTTGGAGCAGCTGGGCCAGTTCGGACAGTTCGAGCCCCGACATCGACGAGGAGAGCGAGAGGCTCTTGGAGTTCTTCAGCAGTCCCCAAGACCCCTACAATCCCATGTGCTTCACTGCGTGCACATTCAGCAGCACCTCCTCACCTCAAACCACCCCCACGGTCTCGAAACAACAAGCCTCACTTCCGCCACCTTCCTCCAAGTCTGACACAGACAcggaggagaaggagagcagCTTTCCTCCTTCATCTGAGGATGACGAAGAAGAACAGCTGTGGAAATCTCTCTGCCCAAAGGACGACCCGTACCACCCTCTAAACTTCCAGGCCTGCCTCCTCAGctccccaacaacaacaacaacaacaacaacaccgcAGTTGGGTGAAGATCCAGATCCCCTTGATGTCCACCACACAAAAAAGCCACCCACTAAGGCAAAGAaatgtaaaaggaaaaaaaaaaaacaaaaaaaaaaaccaggaGAGCGCCCGccccccccgggggggggggggaaaaaaaaaccccccccccaaaaaaaaaagggggggggggaggggggggggacccCACGCAAACCACcggggagaggaaaaaaaaaaaagcaaggcCAGGagaaaaaaaccccccccccccttaccagaAAAAAGGTGCAATTTTCTCCTCTGGTCCAAGTCCATGTCATGCGGACCTGGCCGTTTGCTCGCCAGGCGTCTCGTAAAGGACACTGGGAAGAAATGGCACGAGACCGGGACCGCTTCCGGAGGCGGGTCCAGGAAACGGAGCAGGCCATCGGCTACTGCTTCACCCAGCCCCACCGAGAGAAGATCCGGGCGTATCTGGACGGTGCcttgaaataaataacagtCCTGAACACTGaatgttttatttccttttcgGATGAGAACTTGTGATTGGTTGCAATGCAACAGTGATTTTGATTTTAGGCCAATTAGAAATTGGATGTTGGGCCAACCTTAATGTTCAGTGTCAAGTTGAACAACCTTGTACCTCAAAAGGTTTTATACATTTTGTGACTGTTGCACTGACTGACACTTTCTCCTATTAAGCTCAGCATTAACGTGTGGAATGTTGTTTTTGTATGCCTTATATACTGACCTAGTAATGTAACTTATTTATGCCCTATGgagcttgttttttttattttgtacttttggttttaactgtgtttttatatgtgtgaaaaaaaaaccagTGGTGAATCTAGAAGTTAAAAGTAGATAATGATGATATCGTAAGAAAGCAGAGCTTTACAGTACAAAGTGTTTGGAAAAGATTTTTGTTTAAGCATGATGTATAGATATGATGTTTTGGTGCAATTCTTGTCTTTTGTAGTGTTCAAATATTTAAGTTTTTGATATTTAagttttgtcttgtgttttcttatttggtgGCACATAATAGCAGCCTTTTAGCACCGAGTGTGGAGATGGAtatctttattattatattgaccGGAAAGATTCAAATACTTTGTCCTATGTGACTGGACTCAGCTCTTCATGGTAACGTCATGTAGACAGAAAGATGTCCCAAAACAAATTGTCTGTAGCAAATTTCTTATTAGGTGCTTTGCCAGATCAATAAAATTTGTTACACTGTA

Function

NR:

description
PREDICTED: protein phosphatase 1 regulatory subunit 15A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112618 False 1760 lncRNA 0.38 2 10067929 10069774
XM_039808901.1 True 2736 mRNA 0.47 4 10067916 10072510

Neighbor

gene id symbol gene type direction distance location
LOC120563691 NA coding downstream 187326 9765862 ~ 9880590 (-)
psma1 psma1 coding downstream 487464 9576588 ~ 9580452 (-)
rpl27a rpl27a coding downstream 556548 9506566 ~ 9511368 (-)
LOC120564823 NA coding downstream 557845 9509942 ~ 9510071 (-)
akip1 NA coding downstream 561813 9502922 ~ 9506103 (-)
rps13 rps13,LOC107586033,LOC107700620 coding upstream 454 10072964 ~ 10076964 (-)
LOC120564824 NA coding upstream 783 10073293 ~ 10073422 (-)
si:dkey-10o6.2 LOC104921785,LOC100704824,LOC102313177,LOC101482952,LOC102782089,LOC102213179 coding upstream 69273 10141783 ~ 10149106 (-)
tdg.1 tdg,LOC103366448 coding upstream 93814 10166324 ~ 10173342 (-)
LOC120564668 abhd2 coding upstream 313815 10386325 ~ 10397440 (-)
G83613 NA non-coding downstream 175161 9891384 ~ 9892755 (-)
G83610 NA non-coding downstream 179244 9888444 ~ 9888672 (-)
G83609 LOC107690399,LOC105905572,LOC104946089 non-coding downstream 180950 9882235 ~ 9886966 (-)
G83606 NA non-coding downstream 286802 9780635 ~ 9781114 (-)
G83538 NA non-coding downstream 555889 9511804 ~ 9512027 (-)
G83669 nucb2 non-coding upstream 60237 10132747 ~ 10134745 (-)
G83699 NA non-coding upstream 111726 10184236 ~ 10184640 (-)
G83703 LOC103379807,LOC105006114,LOC103366387,LOC101079219 non-coding upstream 117309 10189819 ~ 10191806 (-)
G83744 api5 non-coding upstream 130221 10202731 ~ 10204403 (-)
G83746 NA non-coding upstream 142893 10215403 ~ 10277798 (-)
LOC120563773 LOC102779219 other downstream 17382 9894777 ~ 10050534 (-)
LOC120564711 NA other downstream 516497 9542670 ~ 9551419 (-)
cav1 cav1 other downstream 2206688 7848065 ~ 7861228 (-)
met met other downstream 2235045 7738914 ~ 7832871 (-)
G83064 LOC100699133 other downstream 2776489 7287895 ~ 7291427 (-)
pik3c2a pik3c2a,LOC102781015 other upstream 5561 10078071 ~ 10129957 (-)
tdg.2 LOC104948407,LOC103366417 other upstream 101961 10174471 ~ 10180001 (-)
G83826 mfge8,LOC104961859 other upstream 316734 10389244 ~ 10432144 (-)
scamp2 LOC103379909,LOC103364404,LOC104932119 other upstream 571406 10643916 ~ 10662678 (-)
LOC120564603 NA other upstream 633709 10706219 ~ 10714845 (-)

Expression


Co-expression Network