G83703 (LOC103379807,LOC105006114,LOC103366387,LOC101079219)


Basic Information

Item Value
gene id G83703
gene name LOC103379807,LOC105006114,LOC103366387,LOC101079219
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 10189819 ~ 10191806 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU112684
TTGTATGTTATACACAGTAATGTGACCTGAGTAAAATCTGACTATGAGTACTGTACTTGACCTCTGATCTcaaattattacaaaaaaagatacATCAAAACAGAAAGTCAGTGCAAACACTTTAATTGAACTAATTAGTCGCAACAACAATTCTGTACAAGCAATTTCCTTTTCcaaaaaaatgttaatgttgaaaCACAGGAAGTTCCAGATCCAAAAAATGTGGTTTCACAGGAACCTGATTCCTGCTCCAAACTGAACCCCGTCACATATCCTGCACGAACAGAGAAAATTAGTTGAAATAAATAGCAAATCAGTTTATTTCCAGTGCATGTTAAGGACACTATGCATGTGTCTCTTGAAAGTGTTTATCTACATGATTGTACAGAAACTATTTTCTCAATATTTACTAAGcaacatgcacatacagtacatacacaacTTTCACACATGTGACATTTACACTGCACGAGTTGAAGTCACCCACCTGTACAACCTGTGGTTTTTTGGTCTATGCTGGTCTTTTCTAACTAAATCATTTATCTTCTGTTTGCAGGGAGAGCTATTGGACATCAAGTTTAGCTAGTGTGCCTTAAATGTCTTTAAAGTAAGTCAAATAGGTGCAATTCCAAATCTTACCTAAAACTAGCTACCCTTATCAGCCCTACCTGTCTCCACTCTGGACTCCCATGGGAATGCAGTAATTCAGCTCCAGTCTGGCAATGTTTCCCAAACGCAGCACAATGCCCAGTCCATATGACCAACGGATGCTTTCGGCCAGTTTCTTCAAATGTGCTtttggcccctcacctgaTTAAGGTTACAAAGGTTTCCGGCATTGAGGAAGAAGTGTGTTCTGAAGAGGTCACCAAAGCCCCCCTTGCCTGGTCTGAAGGGTAGAGGGGTGTAAAGGTGGAGGCCTCCAGCCCAGTAGCCCTCTCCTCCCAGGTAGTCACCTGCCACACCTTCACTCTGTGGGCCCAAACTGTACATACTGAATCCCCTGATACTGGTGGGGCCACCAAGATAGAACCTAGAAGGTTGACAAagacacataaaacataaaatatgtaataCAGAAAGAACCCTACAGTtaattgtgttttaaaaaaaatttaatttagtttGCACAATTGCAGCATTTTGCGTCAAAAACTTCACTCCTAAGTCATAACTTGGTCAAATCTGAACACACATCCATGATACACATATGTTTAGAATCAACGTGATTTACACTTTTCAAGGACATATATACTATCTGCAATGTCCATCGcaaataaacatacatatatctacTTAGAAATCATTGAAAAAAAGACACTCCTTCAGAACTTGCCTGAGAATGATCACGTTTTTAAGTATTCTTCAGTATTAAAGTAGTGATAGTTGTCTAGACAGCCATGGGTACATTGCAAACAGGAACTGCCAATAGATAATTCAAAAATACTTTTAATGGTGCCAATTtgccaaaatgaaaacaaaatgtaggcgggggaaaaaaaacagtctcTAGCTGTCTCAAGTcaagacttaaaaaaaacccTGGTCTTGTGGATAATGGTAATAGGGTGGTGAATTGTAGTTCTGTACCGGTCTGCTATGCTTGTTGGCTTGTCACCAATGGGCAGGAGCAAACCGCCCCACAATGAGGCAGAAAGGACCTGGAGGAGAAAGTCAAAGGGTTTAGTCACAACAATCTAACAAAGAAGATaagaacataaaaatatattccTGGCTAAAG

Function

NR:

description
PREDICTED: sorting and assembly machinery component 50 homolog A isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112684 True 1741 lncRNA 0.39 3 10189819 10191806

Neighbor

gene id symbol gene type direction distance location
tdg.1 tdg,LOC103366448 coding downstream 16477 10166324 ~ 10173342 (-)
si:dkey-10o6.2 LOC104921785,LOC100704824,LOC102313177,LOC101482952,LOC102782089,LOC102213179 coding downstream 40713 10141783 ~ 10149106 (-)
rps13 rps13,LOC107586033,LOC107700620 coding downstream 112855 10072964 ~ 10076964 (-)
LOC120564824 NA coding downstream 116397 10073293 ~ 10073422 (-)
LOC120563691 NA coding downstream 309229 9765862 ~ 9880590 (-)
LOC120564668 abhd2 coding upstream 194519 10386325 ~ 10397440 (-)
acanb NA coding upstream 257534 10449340 ~ 10467674 (-)
map1ab map1a,LOC101157288,LOC107093210 coding upstream 354969 10546775 ~ 10632785 (-)
trex4 LOC104932121 coding upstream 492047 10683853 ~ 10686618 (-)
LOC120563355 NA coding upstream 502078 10693884 ~ 10705324 (-)
G83699 NA non-coding downstream 5179 10184236 ~ 10184640 (-)
G83669 nucb2 non-coding downstream 55074 10132747 ~ 10134745 (-)
G83613 NA non-coding downstream 297064 9891384 ~ 9892755 (-)
G83610 NA non-coding downstream 301147 9888444 ~ 9888672 (-)
G83609 LOC107690399,LOC105905572,LOC104946089 non-coding downstream 302853 9882235 ~ 9886966 (-)
G83744 api5 non-coding upstream 10925 10202731 ~ 10204403 (-)
G83746 NA non-coding upstream 23597 10215403 ~ 10277798 (-)
G83759 NA non-coding upstream 98990 10290796 ~ 10294507 (-)
G83765 NA non-coding upstream 119281 10311087 ~ 10311373 (-)
G83781 LOC106535632,LOC105926242,LOC107092206,LOC107388379,LOC103366310,LOC106927940 non-coding upstream 158677 10350483 ~ 10354409 (-)
tdg.2 LOC104948407,LOC103366417 other downstream 9818 10174471 ~ 10180001 (-)
pik3c2a pik3c2a,LOC102781015 other downstream 59862 10078071 ~ 10129957 (-)
ppp1r15b LOC104921782,LOC104967023,LOC106964268,LOC103156571,LOC103465711,LOC102222546 other downstream 117309 10067916 ~ 10072510 (-)
LOC120563773 LOC102779219 other downstream 139285 9894777 ~ 10050534 (-)
LOC120564711 NA other downstream 638400 9542670 ~ 9551419 (-)
G83826 mfge8,LOC104961859 other upstream 197438 10389244 ~ 10432144 (-)
scamp2 LOC103379909,LOC103364404,LOC104932119 other upstream 452110 10643916 ~ 10662678 (-)
LOC120564603 NA other upstream 514413 10706219 ~ 10714845 (-)
oaz2a oaz2,LOC104929548,LOC101470759,LOC102200097,LOC106531198 other upstream 631480 10823286 ~ 10913217 (-)
ptpn9a ptpn9 other upstream 981747 11173553 ~ 11260961 (-)

Expression


Co-expression Network