G83744 (api5)


Basic Information

Item Value
gene id G83744
gene name api5
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 10202731 ~ 10204403 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU112737
GCCCCCTCTGAGTTGACTAATATCTTTAGTCAATTAGTAattttttaaaatcatttttaatgctAAATGACTTATTGAAAAATTGCCTTGGTAGCCAAgtggttacagtgtgtgtgccgTATAACCGCAACATCATGCATGACATCAGCAACATGTCATAACTCCCCCCCGCCCCATTTCAACAAGGTgaaaatgcaacaacaaaataGTAAAAGTAACTCTATTtactaaatacaaaaatgtgtcacatgaccaaatgtgcagttgaaaataaaaaaggtgaaCATGCGACAGAACAGCAAAAATAAttcaatacaacaaaaataatagGAAAAATAAAAGGTGCCACAAAGTGCTCCTCACCATAGGTAAAATTGCCAATGGTGGCGCTGTACTTGCCGCTGGGGGGATTGTAAATTTGCCGTGCGTCCCTCCGGGGCAGAGGAGAGACCTGTTTCTTTGTGCTGCCACCGGAGCCTATCTCCTCCCCTGACGGGCGCTTGGGCGCTACAGCCTCTGACTTCTGGACTGGTTTCCAGGACAGAGTGATTGTGCTCTTGAATGATGGAGGGTTGTGAAAGAGATcCTTGATGAGGATGTTGATGTTGTTTGTGATCTTGAGGGCCACCACTTTGATCTTATTCTCATCTGTTTTCAGAGCATCTCCTGTCTTGCCTTGCAGTGCTACTCGCAGCTGTCTGATGTAAACCTGCAGGCCTCTGGCAAAATACTGTAACCTGTTGAAACACAAAGCACATTCAATTCTGTATGAAAAGTGCCCGTTTTGGGGTAAAATGACCACTGTGAGCTAAACCATCAAACACCCGACATGctcatttattttgtctttgtgcGATACTCCCTCACCTGATCTTGAAGTCTTTGAGTCGCTCAGCATCCACTTTCTCAAGGAGAAAGTCTGGCAGCTTCTTGCCCAGCTGGTGGAAGCCAAAGAGGAGACACTCCACGTAGCTGAACTGCAGTTTCGGCTCCTCGCTTGCAGAGTTCTCTCCGTTCTCCACCTCTTCTGGTGGCAAAGGCATGAACTCC

Function

symbol description
api5 Predicted to enable RNA binding activity. Predicted to be involved in negative regulation of apoptotic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in nucleus. Is expressed in heart. Orthologous to human API5 (apoptosis inhibitor 5).

NR:

description
PREDICTED: apoptosis inhibitor 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112737 True 1050 lncRNA 0.45 4 10202731 10204403

Neighbor

gene id symbol gene type direction distance location
tdg.1 tdg,LOC103366448 coding downstream 29389 10166324 ~ 10173342 (-)
si:dkey-10o6.2 LOC104921785,LOC100704824,LOC102313177,LOC101482952,LOC102782089,LOC102213179 coding downstream 53625 10141783 ~ 10149106 (-)
rps13 rps13,LOC107586033,LOC107700620 coding downstream 125767 10072964 ~ 10076964 (-)
LOC120564824 NA coding downstream 129309 10073293 ~ 10073422 (-)
LOC120563691 NA coding downstream 322141 9765862 ~ 9880590 (-)
LOC120564668 abhd2 coding upstream 181922 10386325 ~ 10397440 (-)
acanb NA coding upstream 244937 10449340 ~ 10467674 (-)
map1ab map1a,LOC101157288,LOC107093210 coding upstream 342372 10546775 ~ 10632785 (-)
trex4 LOC104932121 coding upstream 479450 10683853 ~ 10686618 (-)
LOC120563355 NA coding upstream 489481 10693884 ~ 10705324 (-)
G83703 LOC103379807,LOC105006114,LOC103366387,LOC101079219 non-coding downstream 10925 10189819 ~ 10191806 (-)
G83699 NA non-coding downstream 18091 10184236 ~ 10184640 (-)
G83669 nucb2 non-coding downstream 67986 10132747 ~ 10134745 (-)
G83613 NA non-coding downstream 309976 9891384 ~ 9892755 (-)
G83610 NA non-coding downstream 314059 9888444 ~ 9888672 (-)
G83746 NA non-coding upstream 11000 10215403 ~ 10277798 (-)
G83759 NA non-coding upstream 86393 10290796 ~ 10294507 (-)
G83765 NA non-coding upstream 106684 10311087 ~ 10311373 (-)
G83781 LOC106535632,LOC105926242,LOC107092206,LOC107388379,LOC103366310,LOC106927940 non-coding upstream 146080 10350483 ~ 10354409 (-)
G83784 pdia3 non-coding upstream 155432 10359835 ~ 10361407 (-)
tdg.2 LOC104948407,LOC103366417 other downstream 22730 10174471 ~ 10180001 (-)
pik3c2a pik3c2a,LOC102781015 other downstream 72774 10078071 ~ 10129957 (-)
ppp1r15b LOC104921782,LOC104967023,LOC106964268,LOC103156571,LOC103465711,LOC102222546 other downstream 130221 10067916 ~ 10072510 (-)
LOC120563773 LOC102779219 other downstream 152197 9894777 ~ 10050534 (-)
LOC120564711 NA other downstream 651312 9542670 ~ 9551419 (-)
G83826 mfge8,LOC104961859 other upstream 184841 10389244 ~ 10432144 (-)
scamp2 LOC103379909,LOC103364404,LOC104932119 other upstream 439513 10643916 ~ 10662678 (-)
LOC120564603 NA other upstream 501816 10706219 ~ 10714845 (-)
oaz2a oaz2,LOC104929548,LOC101470759,LOC102200097,LOC106531198 other upstream 618883 10823286 ~ 10913217 (-)
ptpn9a ptpn9 other upstream 969150 11173553 ~ 11260961 (-)

Expression


Co-expression Network