G83819


Basic Information

Item Value
gene id G83819
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 10368773 ~ 10372179 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU112839
cagtataatatgtGAGATAATATACAGTTTTAACTGGACAGTTgtctacaaaaacaaaaccgtAATTTTTAATTTctagtaaaaataaaatcacacatttacagTGTCTGAAGATGCTCACCTGAATCCTCCTGTTCAGCAGCTTACTGGTCAAGATTTTGAGGGAGGGGCAGCGTTCGCGGCAGAAACCGGCCAACCGGCTGAGGTAGCGCGTCGTGCAGGTGTCCCTGACCATGTGACCTGGATGGGCAATGTCCAGCGCCTCAAAGTCATTGTAGATGGAGTGGCCGACGACCACTTTGCCCTCAAGTATACTGAGGAtctacaggagagaagcTCCTCCCTGGCCTGAGCAAAGGGCATGGCGTTGTGCAGGTGATGCCTCCGGATGCCACTCCAGCGAGTCCTGTAATCTGTGACAGGCTGACACGGTCGGACATATTTATCATACAATACGTTGCCATGATAGTCCAGGATGCTGCAACGGGCCAGCTCGCTGCAGCTCCCGCCAGGCCCCGTCCCAACCATCTCACAGTCCAACGCCACCACTGTGGTCGAGCACAAGCTGAGGCACGGCGAGCTCCGCCCACTGACCGGAGGACTCGTCTCAGAGGAGAAACCACTGTCCACCTCCCAAATGTCTTTGAGGGCTGTGACTAAACTGTGGTGCTCAGAAGCTTTAGGCTCAAGGTGTTCAGGTTCAGATACATGAGTGCTCTTGCTTTCAGAGTCCAGAGTGTTTGTATTgttaaattttgtttttttgaccaGTTTATTTTTATCCAGTGGTTCATTATGGTTGTCCATGGTTTTCCTTTTCATGTTGGCAATGCTTATCTTCTGCTGGCATTTTTTCCTAGATCTCGCATTTTCCATGGCACGAAGCATCATCGATTTTTTGCACAAATATCGGTAGTTGCTGAAAAGCCCCCACGAGGCAGCTTTATTCCTTTTTGACGCCTCTGCCATCATCAACACATGAAACTGGCATTGCAGTCATTTCTTTTGATGCATTAAAATAGATCTCATTATTTC
>TU112840
cagtataatatgtGAGATAATATACAGTTTTAACTGGACAGTTgtctacaaaaacaaaaccgtAATTTTTAATTTctagtaaaaataaaatcacacatttacagTGTCTGAAGATGCTCACCTGAATCCTCCTGTTCAGCAGCTTACTGGTCAAGATTTTGAGGGAGGGGCAGCGTTCGCGGCAGAAACCGGCCAACCGGCTGAGGTAGCGCGTCGTGCAGGTGTCCCTGACCATGTGACCTGGATGGGCAATGTCCAGCGCCTCAAAGTCATTGTAGATGGAGTGGCCGACGACCACTTTGCCCTCAAGTATACTGAGGAtctacaggagagaagcTCCTCCCTGGCCTGAGCAAAGGGCATGGCGTTGTGCAGGTGATGCCTCCGGATGCCACTCCAGCGAGTCCTGTAATCTGTGACAGGCTGACACGGTCGGACATATTTATCATACAATACGTTGCCATGATAGTCCAGGATGCTGCAACGGGCCAGCTCGCTGCAGCTCCCGCCAGGCCCCGTCCCAACCATCTCACAGTCCAACGCCACCACTGTGGTCGAGCACAAGCTGAGGCACGGCGAGCTCCGCCCACTGACCGGAGGACTCGTCTCAGAGGAGAAACCACTGTCCACCTCCCAAATGTCTTTGAGGGCTGTGACTAAACTGTGGTGCTCAGAAGCTTTAGGCTCAAGGTGTTCAGGTTCAGATACATGAGTGCTCTTGCTTTCAGAGTCCAGAGTGTTTGTATTgttaaattttgtttttttgaccaGTTTATTTTTATCCAGTGGTTCATTATGGTTGTCCATGGTTTTCCTTTTCATGTTGGCAATGCTTATCTTCTGCTGGCATTTTTTCCTAGATCTCGCATTTTCCATGGCACGAAGCATCATCGATTTTTTGCACAAATATCGGTAGTTGCTGAAAAGCCCCCACGAGGCAGCTTTATTCCTTTTTGACGCCTCTGCCATCATCAACACATGAAACTGGCATTGCAGTCATTTCTTTTGAGGTAGCTAGCACGTGTGTCAGAACATGCCTGGACATATGTCCTTTGCTCTTCATCTGATTGGCTCCTTCTCTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112839 False 1035 lncRNA 0.48 3 10368863 10372179
TU112840 True 1084 lncRNA 0.48 3 10368773 10372179

Neighbor

gene id symbol gene type direction distance location
tdg.1 tdg,LOC103366448 coding downstream 195431 10166324 ~ 10173342 (-)
si:dkey-10o6.2 LOC104921785,LOC100704824,LOC102313177,LOC101482952,LOC102782089,LOC102213179 coding downstream 219667 10141783 ~ 10149106 (-)
rps13 rps13,LOC107586033,LOC107700620 coding downstream 291809 10072964 ~ 10076964 (-)
LOC120564824 NA coding downstream 295351 10073293 ~ 10073422 (-)
LOC120563691 NA coding downstream 488183 9765862 ~ 9880590 (-)
LOC120564668 abhd2 coding upstream 14146 10386325 ~ 10397440 (-)
acanb NA coding upstream 77161 10449340 ~ 10467674 (-)
map1ab map1a,LOC101157288,LOC107093210 coding upstream 174596 10546775 ~ 10632785 (-)
trex4 LOC104932121 coding upstream 311674 10683853 ~ 10686618 (-)
LOC120563355 NA coding upstream 321705 10693884 ~ 10705324 (-)
G83786 pdia3,LOC100304813 non-coding downstream 891 10361594 ~ 10367882 (-)
G83784 pdia3 non-coding downstream 7366 10359835 ~ 10361407 (-)
G83781 LOC106535632,LOC105926242,LOC107092206,LOC107388379,LOC103366310,LOC106927940 non-coding downstream 14364 10350483 ~ 10354409 (-)
G83765 NA non-coding downstream 57400 10311087 ~ 10311373 (-)
G83759 NA non-coding downstream 74266 10290796 ~ 10294507 (-)
G83854 NA non-coding upstream 165652 10537831 ~ 10540661 (-)
G83911 NA non-coding upstream 552324 10924503 ~ 10925018 (-)
G83941 NA non-coding upstream 638683 11010862 ~ 11011238 (-)
G83942 NA non-coding upstream 639119 11011298 ~ 11012402 (-)
G83974 NA non-coding upstream 688888 11061067 ~ 11061304 (-)
tdg.2 LOC104948407,LOC103366417 other downstream 188772 10174471 ~ 10180001 (-)
pik3c2a pik3c2a,LOC102781015 other downstream 238816 10078071 ~ 10129957 (-)
ppp1r15b LOC104921782,LOC104967023,LOC106964268,LOC103156571,LOC103465711,LOC102222546 other downstream 296263 10067916 ~ 10072510 (-)
LOC120563773 LOC102779219 other downstream 318239 9894777 ~ 10050534 (-)
LOC120564711 NA other downstream 817354 9542670 ~ 9551419 (-)
G83826 mfge8,LOC104961859 other upstream 17065 10389244 ~ 10432144 (-)
scamp2 LOC103379909,LOC103364404,LOC104932119 other upstream 271737 10643916 ~ 10662678 (-)
LOC120564603 NA other upstream 334040 10706219 ~ 10714845 (-)
oaz2a oaz2,LOC104929548,LOC101470759,LOC102200097,LOC106531198 other upstream 451107 10823286 ~ 10913217 (-)
ptpn9a ptpn9 other upstream 801374 11173553 ~ 11260961 (-)

Expression


Co-expression Network